| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0815 |
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| Symbol | |
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| ID | 6184385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 699698 |
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| End bp | 701245 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671444 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_001797634 |
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| Protein GI | 171463521 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATA AAGTAATTAT TTTTGATACT ACTTTGCGTG ATGGTGAACA GTCGCCTGGC
GCATCGATGA CTAAAGACGA AAAAGTACGC ATTGCTCGCC AGTTAGAGCG TCTTAAAGTG
GATGTCATCG AGGCTGGTTT TGCAGCCAGC TCTGAAGGTG ACTTTCAGGC GATCTCTGCG
GTTGCTGCTG CAGTGAAAGA CTCTATTGTC TGCTCACTCG CTAGAGCGAA TGACAAGGAC
ATCACGCGTG CAGCAGATGC TTTACAAGCA ACTAATGCCA AGCGCATTCA TGCATTCTTG
GCTACCAGTC CATTGCATAT GGCCGTGAAA TTACGCATGT CACCAGAAGA GGTTTTGGAG
CAGGCCAAGC GCTCGATTCG TTTTGCGTGC AATCTAGCTT CAGACATTGA GTTTTCTGCA
GAAGACGGCT ATCGCTCAGA AATGGATTTC TTGTGCAGAG TAGTTGAGGC GGTGATTAAC
GAAGGCGCAA GCACGATCAA TATTCCAGAT ACGGTTGGTT ACGCAACGCC CGAGTTGTAC
GGAGAATTTA TAAAAACTTT GCGTACGCGT GTGCCTAATT CAGATAAGGC TGTGTGGTCT
GTTCACTGCC ATAACGATTT AGGTATGGCG GTTGCCAACT CATTAGCTGG TGTGAAGATT
GGTGGAGCTC GTCAAATTGA GTGCACGATC AATGGCTTGG GCGAACGTGC TGGTAATACC
GCATTAGAAG AAATTGTGAT GTCTTTGCGC ACTCGTAAAG ATTATTTTGA TATGGTCTGC
GGTATCGATG CAACTCAGAT CGTGCCAGCA TCTAAATTAG TTTCTCAAAT AACAGGTTTT
ATTGTTCAGC CGAATAAGGC AGTAGTTGGT GCTAATGCGT TTGCGCATAC ATCTGGCATT
CATCAGGATG GTATTTTGAA GAATCGCGAT ACCTATGAAA TCATGCGTGC AGAAGATGTG
GGTTGGTCTG CCAATAAAAT TGTGTTGGGT AAGTTATCTG GCCGCAATGC TTTTAAGCAA
CGCTTGCAAG AGCTGGGGAT TACTGTGGAA GCGGAGGCTG ATTTAAACGT AGCCTTCACT
CGATTTAAGG CTTTGGCGGA TCAAAAGTCG GAGATATTTG ATGAAGATAT TATCGCCATC
ATGTCCGACT CTGCTGCTGC GGAAGAGGGT GAACACTATA AATTTATTTC TTTGAGTCAG
CATTCTGAAA CGGGTGAGCG CCCTAAATCA CGTGTAACCT TCCGCATGGG CGATAGAGAA
ATTAGTTCAG AGGCAGAGGG TAATGGCCCT GTTGACGCTA GCTTGAACGC TATTGAGGGC
ATTGCTAAGA GTGGGGCGGA ACAGCTGCTC TATTCAGTCA ATGCAATTAC TTCCGGTACA
CAATCACAGG GTGAGGTCAC CGTGCGCCTG GCAAAAGGCG GCCGTATCGT GAATGGTGTT
GGTACGGACC CAGACATCAT TGCGGCATCA GCAAAAGCGT ATTTATCGGC ACTAAATAAG
CTTCATGATC CTAGTCAGGC CAAGTTAAAT GCCCAAATGA CGCCTTAA
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| Protein sequence | MSDKVIIFDT TLRDGEQSPG ASMTKDEKVR IARQLERLKV DVIEAGFAAS SEGDFQAISA
VAAAVKDSIV CSLARANDKD ITRAADALQA TNAKRIHAFL ATSPLHMAVK LRMSPEEVLE
QAKRSIRFAC NLASDIEFSA EDGYRSEMDF LCRVVEAVIN EGASTINIPD TVGYATPELY
GEFIKTLRTR VPNSDKAVWS VHCHNDLGMA VANSLAGVKI GGARQIECTI NGLGERAGNT
ALEEIVMSLR TRKDYFDMVC GIDATQIVPA SKLVSQITGF IVQPNKAVVG ANAFAHTSGI
HQDGILKNRD TYEIMRAEDV GWSANKIVLG KLSGRNAFKQ RLQELGITVE AEADLNVAFT
RFKALADQKS EIFDEDIIAI MSDSAAAEEG EHYKFISLSQ HSETGERPKS RVTFRMGDRE
ISSEAEGNGP VDASLNAIEG IAKSGAEQLL YSVNAITSGT QSQGEVTVRL AKGGRIVNGV
GTDPDIIAAS AKAYLSALNK LHDPSQAKLN AQMTP
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