Gene Pnec_0805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0805 
Symbol 
ID6183894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand- 
Start bp692542 
End bp693078 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content44% 
IMG OID641671435 
ProductRDD domain containing protein 
Protein accessionYP_001797625 
Protein GI171463512 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.951313 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCTG CTGAACTAAC CGTATTACCT TCCCCACAAT TTTGGCGGAG AGTTTCTTGC 
TGTCTATACG AGCAGCTTGT CTTATTGGGC GTTATCGCAT TTACATTTTT GGTGCCCAAT 
CTTGGTCTGG GAATTCTGTT CGGCCTTTCA TTGCCAAGCT GGCTTACTTT CTTATACCTT 
TATGCGGTCT TGGGAATCTA TTTCGTTTGG TACTGGACCA AGTCCTGTCA AACTCTTGCT 
ATGCAAACCT GGCGCGTCCG TATTATTGGA AAAAACGGAC ATAACCTCAG CAAACGACAA 
GCGTTCTGGA GATACGTCTA TGGGTCTCTA TGGTTAATCC CTTGTGTTTT ATTGCAATGG 
GCTTTTCATC TAGAGAAGTG GCAAATTATT GAAATGCTCT TTTCTATAGC GCTATTCATT 
TGGCCTTTGA GCATTTACCT TGACCGACAA AATTACCTGT ATCGACAAAG TCTTCCTGAC 
CGTTTGGCTG GAACTCGCCT AGTCGAGCTA CCCAAAAATC TCGTAACACT GTCCTAA
 
Protein sequence
MTPAELTVLP SPQFWRRVSC CLYEQLVLLG VIAFTFLVPN LGLGILFGLS LPSWLTFLYL 
YAVLGIYFVW YWTKSCQTLA MQTWRVRIIG KNGHNLSKRQ AFWRYVYGSL WLIPCVLLQW 
AFHLEKWQII EMLFSIALFI WPLSIYLDRQ NYLYRQSLPD RLAGTRLVEL PKNLVTLS