| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0795 |
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| Symbol | |
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| ID | 6184179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 685483 |
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| End bp | 687870 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671426 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_001797617 |
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| Protein GI | 171463504 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 0.791871 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGCTCC CGTTAGAAAC TGTCAAAACA TCGGAATTAG TTGGAAGCGC CTTGCTTAAA
GACGCTTCGC TTGACTTAGC TCAAGCACAA TTGTTGGAGA TTAATTCCAG CACATCTCAA
AGCAAAAAAA AATCAATCAT TGCGAGCTTG TTGGCGCAAT CGAGTCGGCA TTTGTTTGGG
CCTACCTCTG CTCCCAGTTT TCTCCTTAAG CATCAAGTGG TTTCCATTGA GGGACTGCTC
TCAAAGCTTA CTTATCTCAA GCCCGAAGAA GTAGCGCAAG TCAAAAAAGC ATTTCAGTTT
TCTGATGCGG CACATTTAGG TCAATATCGC CACAGCGGCG AACCATACAT TACTCATCCA
GTTGCCGTAG CTGAGCTCTG TGCCACTTGG CGCTTGGATG CGCCCTCCAT CATGGCGGCG
TTGCTACATG ATGTGATTGA GGACACCGGC TGCACAAAAG TGGATCTGGT GGAGAAGTTC
GGCAGCAAGG TTGCAGAATT GGTTGAGGGT TTAACCAAGC TCGATAAATT GGAGTTTCAA
AGTCACGCAG AAGCGCAGGC AGAAAGCTTT CGCAAAATGT TCATGGCTAT GGCGCGCGAT
GTTCGCGTTA TTTTGGTTAA GTTGGCGGAT CGCACTCACA ATATGCGCAC GCTCGATGCG
GTACCAATGG AGAAACGTCG TCGCGTAGCC GCAGAAACAA TCGAAATCTA TGCACCGATT
GCTCATCGCC TTGGGTTAAA CGTCATTTAT CGCGATCTAC AGGATTTAAG CTTCCGCTAT
TCCATGCCGA TGCGTTTCCG GGTTATTGAA GGCGCCGTAA AGCGGGCGCG TGGCAATCGT
AAGGAAATGG TTGAGAAGGT TCTACAAGCT TCGCGCATGG CATTTGCTAA GGCCAATTTA
GATGTAGATC TCCGTGGCCG AGAAAAAACG CTCTTTAGCA TCTACAATAA GATGCGCTCT
AGGCATTTAA GTTTTTCACA AGTTCTAGAT GTGTATGCTT TTCGGGTAAC TGTGCATTCG
ATTGATGAGT GCTATCGCAC TTTGGGTATT TTGCATTCTT TATATAAACC CATGCCTGGG
AAATTTAAGG ATTACATTGC CATTCCAAAG TTAAATGGCT ACCAATCTCT GCATACCACC
TTGTTGGGGC CATCAGGTGT TCCGGTTGAG TTTCAGATTC GCACGACCGA TATGCATGCG
GTTGCTGAGG CAGGGGTGGC AGCGCACTGG GCTTATAAAG ACGGCTCACC CGATATGAGT
GAGGTGCAGA ACCGTGCGCA TCAATGGTTA CAGTCTTTGA TAGACATTCA AGATAGTAGT
GGCGACTCAC AAGAATTTTT AGAGCACGTC AAAATCGATT TATTCCTAGA TGCGGTTTAT
GTATTTACGC CTACAGGGCA GATTAGAGCT CTTCCAAGGG GTGCAACAAC CCTTGATTTT
GCTTACTCCA TTCATAGCGA CCTAGGAAAT ACTTGCGTTG CTGTGAAGAT TAATGGTTTG
CAATTGCCGT TGCGTAGCGA ACTTAAAAAT AGTGACATTG TTGAAGTTAT TACTTCTGCG
AGTTCTCAGC CCAATCCTGG TTGGTTGGCT TTTGTGCGCA CCGGTAAAGC ACGTGCCTCA
ATTCGACATT CCTTAAAAAC CAAGCACTAC TCTGAATCTT TGCAGTTGGG CGAGCGACTT
TTGGCAAATG CGTTGCGCCA GCAGGGTGTT GATGCTGCAT TGCTTAGCCC TGAGATTTGG
GAAAAGCTGA CGCATTGGAC AGGCGATAAA ACCAGAGAAG AGGCTTGCGT CAACATTGCC
TTGGGTAGAA GATCTCCTCA AGAGTTGGCA ATTCGTCTCA AAATTCTGAT TGATGATGAA
GGTGGATCAA AGCAGATGCG GCTTGGTGCT ACTGATTGGG TTACGCCAAA TCAAGAAAAT
AATCACCACC AGCGCCAAGC TATTCTTGTG GATGGTCGTG AGGGTAATTC AATCCATTTT
CAAAGTTGTT GCCATCCAAT ACCTGGCGAT AACATTATTG GTTATCTCGG TAAGGGCGAA
GGCCTGCAAG TCCATACTAA TGATTGTCCG GTAGCGCTGC GCAATCTTTC TAAAGATAGT
GATAAGTGGG TTGAAGTGGA GTGGGGTAAA GAGCTCAATC GAGAATTTGA GCTCGACCTG
GCAATTGATA CGCGCCAGGG CAAAGGGGTG TTAGCGCGAG TTGCCAGTAG CGTGACCGCT
GCAGACTCCA ATATCATGAA CGTTTTAATG GAAGACCGCT TTAAAGAAGA TTCCGTGACA
ATTCGCTTTA CGATCCAAGT CTATGATCGT TTGCATCTTT CTAAAGTAAT GCGTAGCTTA
CGTTCGAATC CGGATGTTAT GCGAGTGATC CGTACGCGGG CTGCTTAG
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| Protein sequence | MELPLETVKT SELVGSALLK DASLDLAQAQ LLEINSSTSQ SKKKSIIASL LAQSSRHLFG
PTSAPSFLLK HQVVSIEGLL SKLTYLKPEE VAQVKKAFQF SDAAHLGQYR HSGEPYITHP
VAVAELCATW RLDAPSIMAA LLHDVIEDTG CTKVDLVEKF GSKVAELVEG LTKLDKLEFQ
SHAEAQAESF RKMFMAMARD VRVILVKLAD RTHNMRTLDA VPMEKRRRVA AETIEIYAPI
AHRLGLNVIY RDLQDLSFRY SMPMRFRVIE GAVKRARGNR KEMVEKVLQA SRMAFAKANL
DVDLRGREKT LFSIYNKMRS RHLSFSQVLD VYAFRVTVHS IDECYRTLGI LHSLYKPMPG
KFKDYIAIPK LNGYQSLHTT LLGPSGVPVE FQIRTTDMHA VAEAGVAAHW AYKDGSPDMS
EVQNRAHQWL QSLIDIQDSS GDSQEFLEHV KIDLFLDAVY VFTPTGQIRA LPRGATTLDF
AYSIHSDLGN TCVAVKINGL QLPLRSELKN SDIVEVITSA SSQPNPGWLA FVRTGKARAS
IRHSLKTKHY SESLQLGERL LANALRQQGV DAALLSPEIW EKLTHWTGDK TREEACVNIA
LGRRSPQELA IRLKILIDDE GGSKQMRLGA TDWVTPNQEN NHHQRQAILV DGREGNSIHF
QSCCHPIPGD NIIGYLGKGE GLQVHTNDCP VALRNLSKDS DKWVEVEWGK ELNREFELDL
AIDTRQGKGV LARVASSVTA ADSNIMNVLM EDRFKEDSVT IRFTIQVYDR LHLSKVMRSL
RSNPDVMRVI RTRAA
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