| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0789 |
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| Symbol | |
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| ID | 6182868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 681597 |
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| End bp | 682778 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641671422 |
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| Product | oxygen-independent coproporphyrinogen III oxidase |
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| Protein accession | YP_001797613 |
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| Protein GI | 171463500 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.284669 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTTAATT CAAATTCCAA TAAAGTCACT TTAAGTGCAT TGCCGCCATT GGCTTTGTAC
ATTCACTTTC CATGGTGCGA AAAGAAGTGC CCTTATTGCG ATTTCAATTC GCATCAAATT
AAAAAAGATA AGTCGGGTTT TGATGAAGCA CGATACATCA AAGCACTGAT TGCTGACTTA
GAAACGGAAT TGCCCAATAC TTGGGGGCGT CAAGTTCACA GCATTTTTAT TGGTGGCGGT
ACACCCAGTC TACTCTCCGC CGAAGGTATG GATCAACTGC TTTGCGCAAT ACGTGCCAGA
ATAAATCTAG AGCCTGCTGC CGAAATCACG ATGGAGGCTA ATCCTGGGTC TGTTGAAGCG
GAAAAATTTG CCGGCTTTGC TGAGGCCGGA ATTAATCGCG TTTCTCTAGG AATACAAAGC
TTCCAGGACG AACAATTAAA AGCTTTGGGT CGGATTCACA ACGGTGAAGA AGCAAAATGT
GCAATTCAAA TTGCATTGAG GCATTTTAAG TCAGTGAACT TAGATCTGAT GTATGGCTTA
CCCAATCAGA CCCTAGAACT AGCAAAGGCG GATATTGAAA CCGCCTTATC ATTTAAGACG
CACCACCTCT CCTTCTACAA TCTTACCTTA GAGCCGAATA CTTACTTTGC TAGCTTTCCA
CCTAAGCTGC CCAGCGAAGA TGAAATTGAT GCAATCCAAG AGCAAAATTT AGACTTACTC
ACTAAGGCAG GATATCAACA CTACGAAGTC TCTGCATATG CCCATAAAAA TCAAGAGTGC
AAACATAACC TGAACTACTG GCGCTTTGGT GATTACATCG GTATTGGTGC AGGGGCGCAT
GGCAAGGTTT CTTATCCGGA TCGAATTACA CGGCAAGTCC GAGAGCGCCA ACCTGAGGCC
TACATGACTG CGATGGAATC CAAAGGTAAT GCGCTCATTG AAAACCGTGA AATAGCAGCT
AAAGATCTTC CATTTGAATT TATGCTCAAT GCCCTAAGAC TGAAAGATGG CGTTGATACC
AGCACCTTTA GTGAGCGTAC TGGCTTGCCT TTGAACGTGA TTAGCAAAGG ACTTGGTGAG
GCCAGCAAAA AGGGTTTGTT GGATGAAAAT CCTAACAGGC TAAAAGCCAC TGCAATGGGA
ATTCGCTACC TTAATAATCT ACAAGAAATA TTTTTGGATT AA
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| Protein sequence | MLNSNSNKVT LSALPPLALY IHFPWCEKKC PYCDFNSHQI KKDKSGFDEA RYIKALIADL
ETELPNTWGR QVHSIFIGGG TPSLLSAEGM DQLLCAIRAR INLEPAAEIT MEANPGSVEA
EKFAGFAEAG INRVSLGIQS FQDEQLKALG RIHNGEEAKC AIQIALRHFK SVNLDLMYGL
PNQTLELAKA DIETALSFKT HHLSFYNLTL EPNTYFASFP PKLPSEDEID AIQEQNLDLL
TKAGYQHYEV SAYAHKNQEC KHNLNYWRFG DYIGIGAGAH GKVSYPDRIT RQVRERQPEA
YMTAMESKGN ALIENREIAA KDLPFEFMLN ALRLKDGVDT STFSERTGLP LNVISKGLGE
ASKKGLLDEN PNRLKATAMG IRYLNNLQEI FLD
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