| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0755 |
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| Symbol | |
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| ID | 6183113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 651690 |
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| End bp | 653213 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671397 |
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| Product | hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit |
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| Protein accession | YP_001797590 |
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| Protein GI | 171463477 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAATA TTAAACAAAA CGACCTCATT CAAAGCGTTG CGGACGCATT TCAATTCATC
TCCTACTGCC ATCCCAAGGA CTTCATTACT GCCATGGGAA AAGCATATGA ACTAGAAAAA
GGTCATGGTG CAAAAGATGC GATCGCTCAA ATCTTGACCA ATAGCCGAAT GTGCGCTGAA
GGCCACCGCC CTCTTTGCCA AGATACTGGC ATTGCCGTAG TTTTTCTCAA AATTGGTATG
AATGTACAGT GGCCTGATGC AACAATGAGT GTCACCGACA TGGTGAACGA AGGTGTGCGT
CGCGCATACC TAAACCCAGA CAATATGTTG CGCGCCTCAG TATTAAGTGA TCCAGCCGGC
AAACGCAAAA ATACTGGTGA CAACACTCCT GCGGTGATTC ATTATGAAAT CGTCCCGGGG
GATGATGTTG AAGTAATTTG TGCTGCCAAA GGTGGTGGCT CAGAAAACAA AGCGAAGATG
GTCATGCTTA ACCCTTCCGA CTCTATCGTC GATTGGGTTC TTAAAACTGT TCCCACTATG
GGTGCAGGCT GGTGCCCTCC TGGCATCCTT GGCATTGGCA TTGGTGGTAC ACCAGAAAAA
GCCATGCTCA TGGCAAAAGA ATCGTTGATG GGTCCAGTAG ATATTCAAGA GTTGATTGCT
CGCGGCGCTA AAACACGCGC TGAAGAATTA CGCCTCGAAA TCTACGACAA AGTAAACAAG
CTGGGCATTG GCGCACAAGG CCTCGGTGGA TTAGCTACCG TACTCGACAT CAAGATCATG
GAATACCCAA CCCATGCTGC TTCATTACCA GTAGCAATGA TTCCAAACTG CGCAGCTACT
CGTCACGTGC ATTTCCATTT GCATGGTGAT GGCCCAGCAA AATTAGAAGC CCCCTCTCTA
TCAGATTGGC CAGATGTCAC TTGGACACCG GATGTTCAAA AATCTAAGCG TGTGAACCTA
GATACATTGA CAACTGCGGA AGTGGCTAGC TGGAAACCTG GTGAAACACT ATTACTCAAC
GGCAAAATTT TGACCGGCCG CGATGCAGCT CATAAGCGCA TTCAGGATAT GCTTGCTAAA
GGCGAAGAAC TGCCAGTGAG CTTTAAAGAT CGTGTGATTT ATTACGTTGG CCCAGTTGAC
CCTGTACGCG ATGAAGCAGT TGGCCCTGCA GGCCCTACAA CAGCAACGCG TATGGACAAG
TTCACAGAAA TGATGCTGTC TAAAACTGGC TTGATCTCGA TGATTGGTAA AGCAGAACGC
GGTCCTGAAG CAATCGAAGC AATTAAGAAA CACAAGTCCG CCTATTTAAT GGCAGTTGGT
GGTGCCGCCT ACCTAGTATC CAAGGCTATT CAGACCTCTA AAGTGGTTGG CTTTGCTGAC
TTAGGCATGG AAGCAATTTA TGAGTTTGAT GCGAAAGATA TGCCGGTGAC TGTTGCCGTA
AACTCAGAGG GCATATCGAT GCACCATGAA GGTCCAAAAG ACTGGCAAGC CAAAATTGCC
GGCATTCCAG TCAAGATTGC TTAA
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| Protein sequence | MTNIKQNDLI QSVADAFQFI SYCHPKDFIT AMGKAYELEK GHGAKDAIAQ ILTNSRMCAE
GHRPLCQDTG IAVVFLKIGM NVQWPDATMS VTDMVNEGVR RAYLNPDNML RASVLSDPAG
KRKNTGDNTP AVIHYEIVPG DDVEVICAAK GGGSENKAKM VMLNPSDSIV DWVLKTVPTM
GAGWCPPGIL GIGIGGTPEK AMLMAKESLM GPVDIQELIA RGAKTRAEEL RLEIYDKVNK
LGIGAQGLGG LATVLDIKIM EYPTHAASLP VAMIPNCAAT RHVHFHLHGD GPAKLEAPSL
SDWPDVTWTP DVQKSKRVNL DTLTTAEVAS WKPGETLLLN GKILTGRDAA HKRIQDMLAK
GEELPVSFKD RVIYYVGPVD PVRDEAVGPA GPTTATRMDK FTEMMLSKTG LISMIGKAER
GPEAIEAIKK HKSAYLMAVG GAAYLVSKAI QTSKVVGFAD LGMEAIYEFD AKDMPVTVAV
NSEGISMHHE GPKDWQAKIA GIPVKIA
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