| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0747 |
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| Symbol | |
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| ID | 6183174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 644725 |
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| End bp | 645492 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641671388 |
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| Product | LrgB family protein |
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| Protein accession | YP_001797582 |
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| Protein GI | 171463469 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1346] Putative effector of murein hydrolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.913908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTGCGTG TCGCACTAAA TAATCTTTTT GATCGGCAAT ATAGTGTAGC TCCTTGGATT
GGCCTAATCG GCGCATTGGG ATTGCTGACT GTATGTGCCG CGCCACTTAC TCTATTAAGT
AGCGGTGGCA CCGCTGCAGC AAGCTCAGCA GGCACGGCTG TCGCAGCAAA TCCTGGAACA
GCAGCCAGTC TTGCCTCAAC TGTTGCAACC GGCAAATCAC CCTTGGAGCA TACTGCCTCT
GCAGCAACCA AAAAGGAATG CAGCTTCTTT AATGTATTAG GCTCGGCGAC AGTCTCTTTA
GCCATACCGA TCTATCGCGG CCTCAGCAGC CTAAAGGGTA GATCCATCCC TTTAGTTGCG
TCACTTTGCA CTGGCGGTTT AGTTTCTATT GTTAGCGCTG TCGGCATTGC CACCTTGCTT
GGAGCAGATA CCAGCATTAC TGGGGCCATG TATCCCAAGT CAGTCACCGC ATCAATTGCT
ATGGGTATTA CCGAACGTAT TGGCGTATCA CCCACTCTCA CAGCAATCTT TGCAGTGAGC
ACCGGAATAT TTGGTGCAAT ATTGGCGCCA TTTATTCTTA ACGCATTAGG TATAAAAGTC
TGGTGGCAAA GAGGTTTTGC GATTGGCATT GGTGCTCATG GCATTGGCAC TTCTCGCGCT
TTTAGCATTC ATCCAGAAGC GGGAACCTAT GCTAGCCTAG CTATGGGAAT GAACGGCGTA
GTCAGCGCCG TTGCCATTCC GATTATTTAT CACTTATTTA ATAAGTGA
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| Protein sequence | MLRVALNNLF DRQYSVAPWI GLIGALGLLT VCAAPLTLLS SGGTAAASSA GTAVAANPGT
AASLASTVAT GKSPLEHTAS AATKKECSFF NVLGSATVSL AIPIYRGLSS LKGRSIPLVA
SLCTGGLVSI VSAVGIATLL GADTSITGAM YPKSVTASIA MGITERIGVS PTLTAIFAVS
TGIFGAILAP FILNALGIKV WWQRGFAIGI GAHGIGTSRA FSIHPEAGTY ASLAMGMNGV
VSAVAIPIIY HLFNK
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