Gene Pnec_0744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0744 
Symbol 
ID6182878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp642317 
End bp642709 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content44% 
IMG OID641671386 
Producthypothetical protein 
Protein accessionYP_001797580 
Protein GI171463467 
COG category[L] Replication, recombination and repair 
COG ID[COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.762104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGTGAGC TTCTTCCAGA TAAGGTCAAG GTTATGGTTA AGAATGGCCC TTACTCCAAT 
ACCGTTGAGG TAACTGGGCA CCAGTGGGAA TCTTATCGCT ACGACTATGA CATGATGTCT
GGAAAAATAT CACCAAGCAT CATTGGCACC TATGTACAGA TTCCGTTGAT GCTCGCTTGG
GCGGTAACAA TCCATAAGAG CCATGGCAAA ACCTTGAACA AAGTGAAAGT TGATCTTTCT
TCTGGTGCGT TTGCATCAGG TCAGGTTTAT GTTGCTCTCA GCAGATGTAA AACAATTGAA
GGCATTTCCC TGCAGAGGCC AATTGAGCCG ACGGATGTAA GCTGCGATCA AGAAATTAAA
CGCTTCTATA TGAATTGTTT ATCCACCAAA TAG
 
Protein sequence
MCELLPDKVK VMVKNGPYSN TVEVTGHQWE SYRYDYDMMS GKISPSIIGT YVQIPLMLAW 
AVTIHKSHGK TLNKVKVDLS SGAFASGQVY VALSRCKTIE GISLQRPIEP TDVSCDQEIK
RFYMNCLSTK