| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0721 |
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| Symbol | |
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| ID | 6184212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 625503 |
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| End bp | 625715 |
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| Gene Length | 213 bp |
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| Protein Length | 70 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641671367 |
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| Product | hypothetical protein |
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| Protein accession | YP_001797562 |
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| Protein GI | 171463449 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4969] Tfp pilus assembly protein, major pilin PilA |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 0.873488 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGCAAG GGAAGTGGGT GCAGAAATTT TTAATTGAAC GTTTTCTTGG AGGTTATATG
TATTCGAAAT CTAAACAATC AGGTTTTACC TTGGTTGAAT TATTGGTGGT GATCGCCATC
ATCGGTATTC TTACGGCTAT TGGTATACCG ATGTACTCGG GTTACCAGGC GGCAACGAAA
GTGATTGCCA CAAAGCAAAA CTATGACTGT TAG
|
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| Protein sequence | MQQGKWVQKF LIERFLGGYM YSKSKQSGFT LVELLVVIAI IGILTAIGIP MYSGYQAATK
VIATKQNYDC
|
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