Gene Pnec_0703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0703 
Symbol 
ID6183744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp613434 
End bp614288 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content49% 
IMG OID641671352 
Productbifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 
Protein accessionYP_001797547 
Protein GI171463434 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.32895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value0.316701 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCGC AATTATTAGA CGGTAACGCC CTTTCTAAAA AGCTACGCAC AGAGATTGCA 
GCGCGTAGTG CAATTGTTAC TGCCAAAGGC ACTAGACCTG GCTTAGCGGT CATTGTAGTT
GGCGATAATC CTGCCAGCCA GGTGTATGTC CGCAATAAAG TCAAAGCTTG CGAGGATGTT
GGCTTTCATT CTGTTTTAGA GCGTTACACC GCTGAACTTG GCGAAGAAGA ATTACTTGCG
CGTATTGCCA CCTTAAACGC TGACCCAGCA ATACATGGGA TCTTGGTACA ACTCCCATTA
CCGGAACACA TTGCTTCTGA GCGTGTTCTT GAAGCGATTG CTCCAGAGAA AGATGTGGAT
GGCTTTCACG TTGCCAATGC TGGCGCTCTA ATGGTTGGTC AATCAGAATT CAAGCCCTGC
ACGCCTTATG GTTGCATGAA GATTCTGGAG AGTATTGAGT ATCCGATTCG CAGCGCTCGC
GCTGTAATTG TTGGCGCTTC CAATATTGTC GGCAAGCCAA TGGCAATGCT CTTGCTCCAA
GCAGGTGCGA CAGTCACCAT TTGTAATAGC AAGACACGTG ACTTAGCTCA CCATACCAAG
GATGCCGATA TCTTGGTGGT TGCTACCGGC AAACCTAAAA TGATCTCTGG TGACATGGTA
AAAAATGGCG CCGTAGTGAT TGACGTAGGC ATTAATCGCC TGCCTGATGG CAAGCTTTGT
GGCGACGTAG ATTTTGACAC GGCGAAGTAT GTAGCGGGCT GGATTACCCC CGTTCCAGGC
GGCGTTGGTC CTATGACGAT TACCATGCTC CTCATGAATA CTTTGGAGGC AGCCGAAAAG
GCAGCTAAGC ACTAA
 
Protein sequence
MPAQLLDGNA LSKKLRTEIA ARSAIVTAKG TRPGLAVIVV GDNPASQVYV RNKVKACEDV 
GFHSVLERYT AELGEEELLA RIATLNADPA IHGILVQLPL PEHIASERVL EAIAPEKDVD
GFHVANAGAL MVGQSEFKPC TPYGCMKILE SIEYPIRSAR AVIVGASNIV GKPMAMLLLQ
AGATVTICNS KTRDLAHHTK DADILVVATG KPKMISGDMV KNGAVVIDVG INRLPDGKLC
GDVDFDTAKY VAGWITPVPG GVGPMTITML LMNTLEAAEK AAKH