Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0701 |
Symbol | |
ID | 6183153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 610384 |
End bp | 611250 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641671350 |
Product | exodeoxyribonuclease III Xth |
Protein accession | YP_001797545 |
Protein GI | 171463432 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 0.60209 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGATT CAGTAAGAAT AGCCGCATGG AATGTGAACT CTTTAAAGGT TCGCCTTCCA CAGGTGCTAC GCTGGTTGCA GGATCAGGAA AATAAGCGGC AGCCAATTGA TGCGCTCTGC TTGCAAGAGC TCAAGCTGAC GGATGATAAG TATCCACATA AAGAGCTTGA AGATGCTGGC TACTTGAGTT TGGCTGCCGG GCAAAAAACC TATAACGGTG TAGCCATTAT TGTGCGCAAG GCGGCACTAG CACCGATTGC ATCTGACACA GCAACCAGCT TTCTAAAACC TATTAGAAAC ATTCCCAATT TCAAAGATGA GCAGCAGAGA ATCCTGGCGG CCACGATTCC TTTTGCGGGA ACACCGGCGA TGAGGTTGGT CTCTGCATAT TTTCCAAATG GGCAATCTCC TGATAGCGAT AAATTCGTAT ATAAACTCGG TTGGCTTAAG GCCTTGCATA CATGGCTCGG CGAAGAGCTG GAGAACAACT CGCGCTTAGC TCTATTAGGC GACTTTAATA TTGCTCCAGC TGATGAGGAT GTTCATGATT CCAAGGTCTG GGAAGGGCAG AGCCTGGTTT CACCGCCAGA GCGTGAAGCT TTCCAAGGTT TAATCAAGCT TGGGTTGAAT GATTCCTTCA GAATGTTTGA GCAGGCACCA AAGGTATTTA GTTGGTGGGA CTATCGCATG ATGGGCTTCA GAAGAAATGC GGGTATGCGC ATTGATCATA TCTTGCTCAG CGAAGCGCTA AAAGATCAAT GCATTGCTAG CACGGTCGAT AAAGAACCTA GAACTTGGGA GCAACCTTCC GACCATGCCC CAGTGATAGC CGAATTCAAA AAACCTAATA AAGCAGTTCT AAGCTAA
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Protein sequence | MTDSVRIAAW NVNSLKVRLP QVLRWLQDQE NKRQPIDALC LQELKLTDDK YPHKELEDAG YLSLAAGQKT YNGVAIIVRK AALAPIASDT ATSFLKPIRN IPNFKDEQQR ILAATIPFAG TPAMRLVSAY FPNGQSPDSD KFVYKLGWLK ALHTWLGEEL ENNSRLALLG DFNIAPADED VHDSKVWEGQ SLVSPPEREA FQGLIKLGLN DSFRMFEQAP KVFSWWDYRM MGFRRNAGMR IDHILLSEAL KDQCIASTVD KEPRTWEQPS DHAPVIAEFK KPNKAVLS
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