Gene Pnec_0694 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0694 
Symbol 
ID6183444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand+ 
Start bp604546 
End bp605415 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content46% 
IMG OID641671345 
Productputative transmembrane protein 
Protein accessionYP_001797540 
Protein GI171463427 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value0.815168 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGGAT TGCAGCAGGT ATTCAAATCG TTTGGAATGG CTTTAGTAGG GACCATGCAT 
CCGCGAATGT TGTGGCTCAG CTTACGGCCA TTTTTCATTG TTTCAGTGTT ATGGGGTTGT 
CTTATTTGGC TCACGTGGAC ACCAGCGCTT GAAGCATTAA GCGTCTTCTT AACAACTTCT 
GTATTCACTA GCTGGATCCA AGATGGGCTT ATTTGGGCCG GCTTTGAAAA TGCAAGAGCC 
TGGATCGCAC CATTATTTTT CGTCATGCTG ATTATTCCTT TAATTACGAT CAGCTTGCTA 
ATTTTTATTG CTTTTTCAAC TGTGCCTGCA ATTGTCAAAA TTGCTGCTCG GCAATCCCAA 
TTCCATGATT TGGAATGTAA GCGTGGTGGT GGCTTTTTCG GAAGCCTGGT TTATACCTTA 
TGGTCAACCC TTATTTGCTT GGCGCTCGTG ATGTTGAGCT TACCAGTTTG GTGGGTTCCT 
CCGCTCGTCG CTGTATTACC GCCACTTCTC TGGGGGTGGT TAACGATGCG ACTCATGTCT 
TATGACGTTC TGGCTAAGCA TGCCAGCGCA GAAGAGCGCG ACCTACTCAT TCAAAAGTAT 
CGCTGGCCTT TGCTTTGCAT GGGGGTTGCT TCTGGCATGC TGGGCGCAGT TCCTACCTTC 
TTTTGGGCCA CCTCCGCATT GGCGTTAGTG CTATTTCCGA TAGTCAGTTT TATAGCGCTT 
TGGATTTACT CTTTAATCTT TGTGTTTGCT GCTTTATGGT TCAGCTACTT CTTATTGGAT 
GCGCTCAAGA ATTTGCGCGA AGAAGAATTG GATCGAGCCC TTACAGTGCA ATCGCGTGTT 
GTTGATATGG AACTTCCTTA CCATGGTTAA
 
Protein sequence
MVGLQQVFKS FGMALVGTMH PRMLWLSLRP FFIVSVLWGC LIWLTWTPAL EALSVFLTTS 
VFTSWIQDGL IWAGFENARA WIAPLFFVML IIPLITISLL IFIAFSTVPA IVKIAARQSQ 
FHDLECKRGG GFFGSLVYTL WSTLICLALV MLSLPVWWVP PLVAVLPPLL WGWLTMRLMS 
YDVLAKHASA EERDLLIQKY RWPLLCMGVA SGMLGAVPTF FWATSALALV LFPIVSFIAL 
WIYSLIFVFA ALWFSYFLLD ALKNLREEEL DRALTVQSRV VDMELPYHG