| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0685 |
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| Symbol | |
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| ID | 6184004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 594821 |
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| End bp | 595789 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671340 |
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| Product | transaldolase B |
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| Protein accession | YP_001797535 |
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| Protein GI | 171463422 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0176] Transaldolase |
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| TIGRFAM ID | [TIGR00874] transaldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.947987 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 0.786497 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAGCC CCACCTCAGC ATTAAGCCAA TTAAAGAAAC TAACCACGGT TGTAGCCGAT
ACAGGCGATT TTGAGCGTAT GCAGGCTTTC CAGCCACAGG ATGCGACCAC CAACCCCTCG
CTGATTCTGA AGGCCGCCCA GCAAAGTAAT TACCAAGATC TGGTGAACTC AGTGAAAGCC
ACTCATTCAG GTATGAGTCC GACAGATTTA GTTGATTACA TCCTAGTTGC CTTTGGCCTA
GAGATCCTGA AAATTGTTCC GGGACGTGTA TCTACTGAAG TGGATGCCAG ACTCTCATTT
GATACCAAGG GCACAGTAGC GAAAGCCAAA CATTTAATCG CTTTATATGA ATCACACGGA
ATCGATCGAA ACCGTATTTT GATTAAATTG GCTGGTACAT GGGAAGGCAT TGCTGCCGCA
AAAGAATTAG AGGCCCAAGG CATTCATTGC AATATGACCC TACTCTTCTC ATTAATTCAG
GCAGCAGCCT GTGGCGCCGC CAACGCCAAA TTGATTTCTC CATTTGTAGG ACGCATTACC
GATTGGAATA AAACCAAGCT TGGTGTCAAC TGGAGCGATG CTGCCAATGG TGGAGCAAAT
GACCCAGGCG TAACTTCAGT GAAGAGAATT TTTCATTACT ACAAGCACTT TGGAATCCCC
ACTGAAATCA TGGGAGCCAG CTTCAGAAAG ACTAGTCAAA TACTTGAGCT AGCGGGTTGT
GACCTTTTGA CCATTAGCCC TGAGCTATTG GCTGAGCTCC AAAGTAGCCA TGCACCGGTT
GAGGCAAAAC TTAATGCAGC CAATCCACAA GCTGCCTTGC AGACTGAAGG CATTACACCG
CTTAGGCTCG ATGAATCTAG CTTCCGCCTA CAACTTAATA ATGATGCTAT GGCAACCGAG
AAATTAGCCG AAGGTATTCG CAACTTCTGC TTAGATACAG AGAAGTTAGA GGCGCTATTG
GCGAAGTAA
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| Protein sequence | MNSPTSALSQ LKKLTTVVAD TGDFERMQAF QPQDATTNPS LILKAAQQSN YQDLVNSVKA
THSGMSPTDL VDYILVAFGL EILKIVPGRV STEVDARLSF DTKGTVAKAK HLIALYESHG
IDRNRILIKL AGTWEGIAAA KELEAQGIHC NMTLLFSLIQ AAACGAANAK LISPFVGRIT
DWNKTKLGVN WSDAANGGAN DPGVTSVKRI FHYYKHFGIP TEIMGASFRK TSQILELAGC
DLLTISPELL AELQSSHAPV EAKLNAANPQ AALQTEGITP LRLDESSFRL QLNNDAMATE
KLAEGIRNFC LDTEKLEALL AK
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