| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0674 |
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| Symbol | |
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| ID | 6183906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 584982 |
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| End bp | 585851 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641671328 |
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| Product | HflC protein |
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| Protein accession | YP_001797524 |
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| Protein GI | 171463411 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 73 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCAA ATCGTTTAAT TGCTGCAGGC ATTGGTTTTA TTGTCCTGAT CTATGTGCTG
TCTTCCGGTA TCTTTGTGGT CGATCAACGT AAATTTGCTG TTGTGTTCTC ATTTGGTCAG
ATTGTTCGTG TAATCGAGAA GCCAGGTATT CAGGTAAAGA TGCCGGCACC GTTTGAGAGT
GTGCGTTTCT TTGATCGCCG TATATTGACA ATCGATAACC CTGAGGCAGA GCGTTTTATT
ACTGCCGAGA AGAAAAACCT ATTGGTTGAT TCATATGTGA AGTGGCGCAT TATTGATCCA
CGTAAGTTCT TTATTAGCTT TAAGGGTAAT GAGCGCTTGG CGCAAGATCG CTTAACCCAA
TTAGTTCGCT CTGCACTTAA TGAAGAGTTC ACCAAGCGCA CTGTTCGTGA ATTGATTTCT
GATCAGCGTG AAGAAGTAAT GCAAGGTATA CGCAAGAAGG TTGCAGATGA TGCATCAGAT
ATCGGCGTAG AGATTGTGGA TGTCCGCTTA AAGCGTGTTG ATCTTTTGGC GGAAATCAGC
GATTCAGTTT ATCGTCGTAT GGAAGCAGAA CGTAAACGAG TTGCTAATGA ATTGAGATCT
ACTGGTGCTG CGGAGTCTGA CAAGATTCGC GCAAACGCAG AACGTCAGCG CGACACTATT
TTGGCGGAAG CTTATCGTGA TGCCCAAAAA ATTAAGGGGG CGGGGGATGC CAAGGCGACT
GCACTCTATG CAGAGGCATT TGGGCGTGAT CCGCAGTTTG CTCAGTTCTA CCAAAGTTTA
GAAGCCTATA GAAGTTCATT CAAGGATAAG AAAGACATCA TGGTCGTTGA GCCTAACGGC
GAGTTCTTTA AGTTCTTGCA CAAAAAATAA
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| Protein sequence | MNANRLIAAG IGFIVLIYVL SSGIFVVDQR KFAVVFSFGQ IVRVIEKPGI QVKMPAPFES
VRFFDRRILT IDNPEAERFI TAEKKNLLVD SYVKWRIIDP RKFFISFKGN ERLAQDRLTQ
LVRSALNEEF TKRTVRELIS DQREEVMQGI RKKVADDASD IGVEIVDVRL KRVDLLAEIS
DSVYRRMEAE RKRVANELRS TGAAESDKIR ANAERQRDTI LAEAYRDAQK IKGAGDAKAT
ALYAEAFGRD PQFAQFYQSL EAYRSSFKDK KDIMVVEPNG EFFKFLHKK
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