| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0667 |
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| Symbol | |
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| ID | 6184419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 579341 |
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| End bp | 580498 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671322 |
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| Product | outer membrane assembly lipoprotein YfgL |
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| Protein accession | YP_001797518 |
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| Protein GI | 171463405 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1520] FOG: WD40-like repeat |
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| TIGRFAM ID | [TIGR03300] outer membrane assembly lipoprotein YfgL |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 79 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAAAG AGATGAAGCG TTTGCCGATG CGCATAGGTG CCGCCTTGGT ATTGGGTTCC
GTGGTAATTG CTTTGGTTGC TTGCGGTAGT AGCTCAAGAG TGAGAAAGCC ATCTGAATTG
GTTGCAGTAT CTAATCAATT CGATTTGCAG CCCGTATGGT CAACCAGTAT TGGCTCGTCA
GAATCTTTTA ACTTTCATCC AATTGTTGCG GGTGATGCAG TGTACGCTGC ATCTCATCGA
GGTAATTTAG CCAAAATTGA ATTGGCATCT GGTAATAAAG TGTGGGAAGT ATCTGTGCCA
GAGCGCTTAT CAGTTGGGCC AGGTTCCGAT GGTCGTACTA CTGTTGCCGT AACTACAAAG
GGCATGGTTT ATGCCTATGA CGATACAGGT AAATCCATTT GGAATGTGAG TGTTGGTAGT
GAGGTTTTAA GCGAGCCGGT GGTTGCTGGC GGTGTTGTTA TTGTGCGCGC TCTTGATAAT
CGTTTTATCG GATTAGATGC GCAAACAGGG GTACGCAAGT GGACCTATCA ACGTCAACAA
TCTGCCCTGT CACTGCGAGT GGGTTACGGT ATGTTGGCTA TTGCCAATGA GGTAATCGTT
ACTGGTTTTG CAGGTGGTCG TTTTGGCATG ATTGCCATTG CCAATGGCGG TTTGATTTGG
GAGACTCCAG TATCCTTTCC TAAAGGCTTT TCCGAAATCG AGCGCTTGAA TGACGTAACT
GCTAAGCCAA GCATGGAGGG CGAAATTATC TGCGCTGTTT CGTATCAAGG GCGTATCGGA
TGTGGTCAAG CGCGCACCGG CAATCTGCTG TGGTTCAAAG ATTACTCAAG CTATACCGGT
ACTTCACAAA GTGCGGACAT GGTTTTCTCG GCTAACGAAA AGTCGTATGT CACTGCTTTT
GCAACTAAAG ATGGCACTCA GATTTGGGAA AACACGCAGC TCACTTACCG TGATGTAGGT
GAATCGCTTG CAGTGGGTAG AGTCCTAATA ATGGGCGATG CTCAAGGTTA TATCCATGCA
TTTTCACAGG CGAATGGTGA GATGGTTGCA CGGATTCGTC ACGACAGTAG TCCAATCACG
GCTGCCCCCA TTGCGGTAGG CGGCCTCATC TTGATCCAAT CTCAAGGTGG AAAAATAGCT
GCGTACAGTC CAAAATGA
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| Protein sequence | MTKEMKRLPM RIGAALVLGS VVIALVACGS SSRVRKPSEL VAVSNQFDLQ PVWSTSIGSS
ESFNFHPIVA GDAVYAASHR GNLAKIELAS GNKVWEVSVP ERLSVGPGSD GRTTVAVTTK
GMVYAYDDTG KSIWNVSVGS EVLSEPVVAG GVVIVRALDN RFIGLDAQTG VRKWTYQRQQ
SALSLRVGYG MLAIANEVIV TGFAGGRFGM IAIANGGLIW ETPVSFPKGF SEIERLNDVT
AKPSMEGEII CAVSYQGRIG CGQARTGNLL WFKDYSSYTG TSQSADMVFS ANEKSYVTAF
ATKDGTQIWE NTQLTYRDVG ESLAVGRVLI MGDAQGYIHA FSQANGEMVA RIRHDSSPIT
AAPIAVGGLI LIQSQGGKIA AYSPK
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