| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0665 |
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| Symbol | |
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| ID | 6184586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 577306 |
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| End bp | 578634 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641671320 |
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| Product | histidyl-tRNA synthetase |
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| Protein accession | YP_001797516 |
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| Protein GI | 171463403 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0124] Histidyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.411907 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 82 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATC AAAACGTAAA AAATAAAGTT CAAGAAACGC AGAAGATAAA TGGCGTGCGC
GGCATGAATG ATTTGTTGCC AGCAGATGCT GCTCAGTGGG CACATCTTGA GCATGTTTTG
CGTGATCTCA CTCGCGCATA TGGCTATGAG TTTTTAAGAA CGCCAATTGT TGAAGCAACC
GCAGTATTTC AGCGTGGGAT TGGCGAAGTC ACTGACATTG TTGAAAAGGA AATGTATTCC
TTTGAAGATC GCTTGAATGG CAAGCAATTG GCTTTACGTC CTGAGGGTAC TGCCGCATTA
GTACGTTCCG TTATTGAAAA CAATTTACTT TACGAAGGAC CGAAGCGCCT TTGGTATACC
GGTCCGATGT TTCGCCATGA GCGTCCACAG CGCGGTCGCT ATCGCCAGTT CCATCAATTT
GGGATTGAAG CCTTGGGCTT TGCTGGGCCA GATATTGATG CAGAAATTAT CCTCATGGGC
CAACGTTTAT GGGATGAGTT AGGTTTAAAG GGTGTGCGCT TAGAGATCAA CTCCCTGGGT
CAAGCCCCTG AGCGTGCTGA ACACCGTGCA GCTCTAGTAA TCTACTTTGA GAAACATCAA
GATCAGTTGG ATGAGGATTC AAAACGTCGC CTGTTGAGCA ATCCTTTGCG TATTTTGGAT
TCTAAAAATC CTGAGATGCA GGCATTGATC GAAGGTGCAC CCAAGTTATT GGATTACTTG
GGTGAGGAGT CGCTCAAGCA TTTCAACGCA GTACAGGCTT TACTCAAAGC CAACAACATC
CCTTGCAAAA TCAATCCACG TTTAGTTCGT GGTTTGGATT ATTACAACCT CACTGTATTT
GAGTGGGTGA CTGATGAGTT AGGTGCGCAG GGCACCATCG CCGGTGGCGG ACGTTACGAT
CCATTAATTG AGCGCATGGG TGGCAAAGCG GCGCCAGCAT GTGGCTGGGC GATGGGTATG
GAGCGTGTAC TTGAGCTCAT GAAAGTTTCT GGTTCTTTGC CAGAGACCCG GGCTCAGTGC
GATATTTTTG TCCTACACCA AGGTGGTGAG ACTTTGACGG CTGCCATGAT TATTGCTGAG
CGCTTACGTA GTGCTGGAAT AGATACCATC CTTTTCTGCC CTCCAGATGG TCAGTCCGCT
AGCTTTAAGT CTCAAATGAA GAAGGCAGAC AGTAGTGGGG CTGCTTTTGC AGTCATTATT
GGCCCTGATG AATTAGCCAA GAATGAGGCC CAACTCAAGG ATCTACGTGG CACGGGCGAG
CAGAAGTCGG TTCCATTAGA TGATGTCCTG GGGGCGGCAA TTGATGCCCT AGTAGGCGCC
TCCGAATAG
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| Protein sequence | MTDQNVKNKV QETQKINGVR GMNDLLPADA AQWAHLEHVL RDLTRAYGYE FLRTPIVEAT
AVFQRGIGEV TDIVEKEMYS FEDRLNGKQL ALRPEGTAAL VRSVIENNLL YEGPKRLWYT
GPMFRHERPQ RGRYRQFHQF GIEALGFAGP DIDAEIILMG QRLWDELGLK GVRLEINSLG
QAPERAEHRA ALVIYFEKHQ DQLDEDSKRR LLSNPLRILD SKNPEMQALI EGAPKLLDYL
GEESLKHFNA VQALLKANNI PCKINPRLVR GLDYYNLTVF EWVTDELGAQ GTIAGGGRYD
PLIERMGGKA APACGWAMGM ERVLELMKVS GSLPETRAQC DIFVLHQGGE TLTAAMIIAE
RLRSAGIDTI LFCPPDGQSA SFKSQMKKAD SSGAAFAVII GPDELAKNEA QLKDLRGTGE
QKSVPLDDVL GAAIDALVGA SE
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