| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0662 |
|---|
| Symbol | ndk |
|---|
| ID | 6184474 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010531 |
|---|
| Strand | + |
|---|
| Start bp | 574324 |
|---|
| End bp | 574749 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641671317 |
|---|
| Product | nucleoside diphosphate kinase |
|---|
| Protein accession | YP_001797513 |
|---|
| Protein GI | 171463400 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0105] Nucleoside diphosphate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0130513 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 76 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATTG AACGCACCCT TTCTATTATC AAACCTGATG CTGTCGCTAA AAACGTCATC
GGCAAAATCT ATGACCGTTT CGAATCTGCT GGTTTGAAGA TCGTTGCTTC CAAAATGGCG
CATTTGTCAC AAAATGAAGC TGAGCAGTTC TATGGCGTTC ACAAAGATCG TCCTTTCTTC
AAAGACTTGG TGAGCTTCAT GATTTCCGGT CCCGTAATGA TTCAAGTTTT GCAAGGCGAA
GGCGCTATTG CTAAGAACCG CGATTTGATG GGCGCTACTG ATCCTAAGAA GGCAGAAAAA
GGCACAATCC GTGCTGACTT TGCTGACAGC ATTGATGCAA ATGCCGTTCA TGGTTCTGAC
GCTCCTGAAA CAGCTGCTGT GGAAGTTGCT TTCTTCTTCC CTGGTATGAA TGTTTTCAAT
CGTTAA
|
|---|
| Protein sequence | MAIERTLSII KPDAVAKNVI GKIYDRFESA GLKIVASKMA HLSQNEAEQF YGVHKDRPFF
KDLVSFMISG PVMIQVLQGE GAIAKNRDLM GATDPKKAEK GTIRADFADS IDANAVHGSD
APETAAVEVA FFFPGMNVFN R
|
|---|
| |