Gene Pnec_0657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0657 
Symbol 
ID6184443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp569983 
End bp570741 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content48% 
IMG OID641671314 
ProductPeptidase M23 
Protein accessionYP_001797510 
Protein GI171463397 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG4942] Membrane-bound metallopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACGCA CCTTATTTAA GACTTTCCTC ATTGCGATCT TATCCACATC ATTGATGTTG 
ATAGCAGGGT GTTCTACGCC GCGCACAAAG CCAGCGAGCG TAACTGACCG CAGCGGCGGA
TCGAGTGAGC CGGCGCCGCC TGGATACTAT CGAGTTAAAA AAGGTGACAC CTTGGCGCGA
ATTGCATTGG ATCATGGTAA GGCGCCACGT GATGTTAATC AGTGGAACAA AGCGGCTAAT
CCTGGCTTTA ATCCGAATGT GATTGAAGTG GGTGATTTAA TTTTAATTAA AGCACCTGCT
GGAGCCAAGC CTGCACGTGT TGTTGAGAAA AAACCATCAG CCGATAAGGC GGACTCTTCG
CCAGCCACTC TAGAGTCGGC AAAAACAGAG GTTATTGCAG AGCCTGGTAT TCGCTTATCT
TGGCCCGCTA AAGGCAAGGT CACTGGCGAA TTTAGTGAAA CTAATAAAGG AATTGATATT
GCTGGCAAGG TAGGCGAGCC CATTCTTGCG GCATCCGATG GCAAGGTGGT CTATGCCGGC
AATAGTTTGC GTGGCTACGG CAATCTAGTG ATTGTGAAAC ATGACAATAC CTATCTCACC
GCTTATGCAC ACAACAGCAA GCTCTTGGTA AAAGAGGGTG ATGCTGTACG TAAGGGTCAG
AAGATCGCTG AGATGGGCGA TACAGATGCT AATGCAGCCA AACTGCATTT CGAGTTACGC
GTTAACGGAA AACCAGTCAA TCCAACGCCG TACTTGTAG
 
Protein sequence
MSRTLFKTFL IAILSTSLML IAGCSTPRTK PASVTDRSGG SSEPAPPGYY RVKKGDTLAR 
IALDHGKAPR DVNQWNKAAN PGFNPNVIEV GDLILIKAPA GAKPARVVEK KPSADKADSS
PATLESAKTE VIAEPGIRLS WPAKGKVTGE FSETNKGIDI AGKVGEPILA ASDGKVVYAG
NSLRGYGNLV IVKHDNTYLT AYAHNSKLLV KEGDAVRKGQ KIAEMGDTDA NAAKLHFELR
VNGKPVNPTP YL