Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0645 |
Symbol | |
ID | 6184447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 560180 |
End bp | 560503 |
Gene Length | 324 bp |
Protein Length | 107 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641671308 |
Product | hypothetical protein |
Protein accession | YP_001797504 |
Protein GI | 171463391 |
COG category | [S] Function unknown |
COG ID | [COG0718] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00103] DNA-binding protein, YbaB/EbfC family |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 82 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAAG GTGGACTTGC TGGCCTCATG AAACAGGCTC AGCAGATGCA AGAGAAGATG AAAACCACGC AAGCTGAACT GGCTGCGTTA GAAGTGACCG GCCAAGCGGC TGGAGGCTTA GTAAAAGTAA CGATCTCTGG CAAATACGAA CTCAAGCGTG TACAGATTGA TCCAGGTGCA ATGGACGATC GTGAAATGTT GGAAGATCTC ATTGTGACTG CCTATACAGA AGCATTTAAG CAAGTTGAAG CTGCTAGCGC ACAGATGATG TCTGGAGCTA CTGCTGGTAT GCCAATGCCT CCCGGCTTTA AGTTGCCCTT CTAA
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Protein sequence | MMKGGLAGLM KQAQQMQEKM KTTQAELAAL EVTGQAAGGL VKVTISGKYE LKRVQIDPGA MDDREMLEDL IVTAYTEAFK QVEAASAQMM SGATAGMPMP PGFKLPF
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