Gene Pnec_0645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0645 
Symbol 
ID6184447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp560180 
End bp560503 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content48% 
IMG OID641671308 
Producthypothetical protein 
Protein accessionYP_001797504 
Protein GI171463391 
COG category[S] Function unknown 
COG ID[COG0718] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00103] DNA-binding protein, YbaB/EbfC family 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAG GTGGACTTGC TGGCCTCATG AAACAGGCTC AGCAGATGCA AGAGAAGATG 
AAAACCACGC AAGCTGAACT GGCTGCGTTA GAAGTGACCG GCCAAGCGGC TGGAGGCTTA
GTAAAAGTAA CGATCTCTGG CAAATACGAA CTCAAGCGTG TACAGATTGA TCCAGGTGCA
ATGGACGATC GTGAAATGTT GGAAGATCTC ATTGTGACTG CCTATACAGA AGCATTTAAG
CAAGTTGAAG CTGCTAGCGC ACAGATGATG TCTGGAGCTA CTGCTGGTAT GCCAATGCCT
CCCGGCTTTA AGTTGCCCTT CTAA
 
Protein sequence
MMKGGLAGLM KQAQQMQEKM KTTQAELAAL EVTGQAAGGL VKVTISGKYE LKRVQIDPGA 
MDDREMLEDL IVTAYTEAFK QVEAASAQMM SGATAGMPMP PGFKLPF