| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0636 |
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| Symbol | |
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| ID | 6183639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 546568 |
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| End bp | 548286 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641671299 |
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| Product | putative inner membrane transmembrane protein |
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| Protein accession | YP_001797495 |
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| Protein GI | 171463382 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCAAAC TTACCGCCGC TGCCACTAAA TCAATTCCAC GCATTGTGAT TTTTGCGTTA
ACCTTGGTTA ATGGTTTTGC CGGCCTCTTC TTTCGGGATC CCTGGAAGAA TGAAGATGCA
ATTGGCTTTG GTGGCATGTG GACCCTTTTT CGCGGTAACT CTATCGATTG GATTGTTCCG
CACTTAGCAG GCCGCGATGT CTCTCTTGGA ACACCTCTAC CCTACTGGAT GGGTGCCACA
CTTATTGAAT GGTTTGGGCC TTTTATTGGC GCTGCTAATG CTGCTCGATT GTATGCAGCA
ATTTGCTTCT TCTCCGCAGC ACTAGCTATC TGGTACACAA CCTACTTATT AGGTCGCCGT
CGTGAAGTGC AGCCAATAGC TCTTGCTGTA GGTGGCCAAC CTGACATGAA GAGTTACGGC
ATGACCTTGG CAGATGGGGC ATTACTTATC TTCCTAGCAT GCGTAGGTCT GGCACAACGC
GCTCACGAAA CAACACCAAT GATGGCGCAA TTGATGGGCA TCAGTATCGT GCTCTACGGT
ACGGTGCGTG GCTTAGATAA ACCATGGCAA GGCGGTTTAT GGACGGGTCT TGGTATTGCG
ATCGTCGCGC TCTCTAGCAA TCTCACGCTT AGCTTAATCG TTGTTACCTC AACCATTATT
GCCGTCATTG TGAGCAATGC AAAGTTACGC TTTCGCTGGA CCCTTACCAG CACTGTTTTG
GGTTTAATTG GTTTTGCAAT TTGGCCTGTA ATTTGGTGCA TAGCAGATCT ACCACCATAC
TGGCGCCATA TCACTGAAGA AGGCTGGCGA AATATGCCAG AAATGCGCAT CACCCCTTCA
ATCGAGTCAC TGGGATTCTT GAGTGTGAAC TTTTGGGCTT ATGCCTGGCC TGTATGGCCC
CTGGCAATAG TCTCCTTAGC TCATTGGGGT CACATTAAAG AAGCGGGCGC TTGGCGCGCT
CCTCATCTTT GCATTCCACT TAGCCTATTT ATCGGCTGCT TAATTTACGT TCTATTCCGC
CTTGAGGCAA ACGAACATGA TTTGATGATT TTGATTCCAA GTCTCTCCAT CATTGCGGCA
TTTAGCTTGC CCGTTCTCAA GCGCAGCGTG ATTAGTTTTA TTGATTGGTT TGCAATGTTT
AGCTTCACGC TCATCGCACT AGCTATTTGG ATTATTTGGC TGGCAAAGGT AACGGGCTAT
CCAGAATCCA CTGCGGCCAA TATCGCACGC CTGCTACCTG GGTTTGAGAG TCAATTTAAT
GTGCTGGCAT TTATTGTGGC CCTTGTTATT ACAGGCATAT GGCTTGCAAT TGTTCGCTGG
AGAACTTCAC GCGCTCCAAA GGAAATTTGG CGCTGCCTCA TCATCTCGGC ATCTGGCACC
ACTCTAATGT GGGTTCTACT AATGACGCTC TGGCTGCCAA CAATTAATTT CGCCAAAACC
TATCGCCATG TATCTACGCG CTTGGTGCAA GTGATCCCTT CTGGTGGTGG CTGCATTAAT
ACTAGCAACC TTGGTTTTGC ACAGCTCGCT TCTTTTGAAT ATTTCTCGAA ACTCAATTTT
AGAGATGATC CAAATTGCCC ATGGATGCTT ACCCATAGCC AATCTGAGGC AAAAGCGTAT
GCTCAACTCA ACAATAAAAA ACTTAGCCTA CTTTGGGAAG ATCGTCGCGC TGCTGACCGC
GATGAACGCC TGCGTCTTTA CGAAGTAATC CCTGAATAA
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| Protein sequence | MVKLTAAATK SIPRIVIFAL TLVNGFAGLF FRDPWKNEDA IGFGGMWTLF RGNSIDWIVP
HLAGRDVSLG TPLPYWMGAT LIEWFGPFIG AANAARLYAA ICFFSAALAI WYTTYLLGRR
REVQPIALAV GGQPDMKSYG MTLADGALLI FLACVGLAQR AHETTPMMAQ LMGISIVLYG
TVRGLDKPWQ GGLWTGLGIA IVALSSNLTL SLIVVTSTII AVIVSNAKLR FRWTLTSTVL
GLIGFAIWPV IWCIADLPPY WRHITEEGWR NMPEMRITPS IESLGFLSVN FWAYAWPVWP
LAIVSLAHWG HIKEAGAWRA PHLCIPLSLF IGCLIYVLFR LEANEHDLMI LIPSLSIIAA
FSLPVLKRSV ISFIDWFAMF SFTLIALAIW IIWLAKVTGY PESTAANIAR LLPGFESQFN
VLAFIVALVI TGIWLAIVRW RTSRAPKEIW RCLIISASGT TLMWVLLMTL WLPTINFAKT
YRHVSTRLVQ VIPSGGGCIN TSNLGFAQLA SFEYFSKLNF RDDPNCPWML THSQSEAKAY
AQLNNKKLSL LWEDRRAADR DERLRLYEVI PE
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