Gene Pnec_0632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0632 
Symbol 
ID6183385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp543072 
End bp543428 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content43% 
IMG OID641671295 
Producthypothetical protein 
Protein accessionYP_001797491 
Protein GI171463378 
COG category[R] General function prediction only 
COG ID[COG5633] Predicted periplasmic lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value0.656745 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT ACCTTTCAAT TCTTTTGACG ACGCTTGCAC TGGCGGCTTG CAGTTCAACG 
CCATCAATGA AAGATATGAC AGTACGCATG GGGGATACGG ATAGCATTCA AATTATCGAT
ATGCGAAGCT TGATGCGCAA TGGTGTATTG ACTGCACAGG TAACCATTCA GAATGACAGC
AAATCTAATC TGGTTTCTTA TCGATTCAAG TGGATTGGTA AAAACGGTAT GACCGTCACA
GATGAAGAGC CATGGAAGCC GGTGACAGTG GGCAAAGGGC AGTCGACAGT TATTATGGGT
ATAGCCCCAA CACCAGATGC TACTGACTTT CGTTTTGAGT TAAATCAATA CAAATAA
 
Protein sequence
MKKYLSILLT TLALAACSST PSMKDMTVRM GDTDSIQIID MRSLMRNGVL TAQVTIQNDS 
KSNLVSYRFK WIGKNGMTVT DEEPWKPVTV GKGQSTVIMG IAPTPDATDF RFELNQYK