Gene Pnec_0624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0624 
Symbol 
ID6183420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp536176 
End bp536439 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content46% 
IMG OID641671290 
Productputative cytochrome c5 
Protein accessionYP_001797486 
Protein GI171463373 
COG category[C] Energy production and conversion 
COG ID[COG3245] Cytochrome c5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.617853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value0.467758 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTAA GTTTGGAGAT AAGGCAAAGT GGGCACCCCT TAATTGCAGA GGGCCAAGCA 
ACCCTTACAG CCCATGCTTA CTTTGGTGTG AGAGGAATGC CACCCAAAGG CGGCAATCCC
AATCTGAGTA TTGAAGGTTT TTCAGATGCT TTGGTCTATA TGGTGAATAA CTCAGGCGGC
AGTTGGAAAT CACCAGACGC CAAAATGCTT GCAGCAATTA ATAAGGAGCT TGAAGCGCGT
AAAGCAGGCG TAAATAAGAA ATAA
 
Protein sequence
MRLSLEIRQS GHPLIAEGQA TLTAHAYFGV RGMPPKGGNP NLSIEGFSDA LVYMVNNSGG 
SWKSPDAKML AAINKELEAR KAGVNKK