Gene Pnec_0608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0608 
Symbol 
ID6183429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp527160 
End bp527591 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content46% 
IMG OID641671276 
Producthypothetical protein 
Protein accessionYP_001797472 
Protein GI171463359 
COG category[R] General function prediction only 
COG ID[COG5553] Predicted metal-dependent enzyme of the double-stranded beta helix superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCACC CGCAGTATTA CCAACAATAC CTCTTGTATG CAGACCCCTT AGATCGGTTC 
TCAGTTGTCA GCTTTGTATG GGGCCCTGGA CAAAAAACTC CGGTCCACAA TCACACCGTT
TGGGGGATGG TTGGTCAACT ACGCGGCGAA GAAAAAGGCA CTCCTTATTA TCGACAAGCA
AATGGTAGCT TTAAAGCGGG TGAATCCTGC ATCAACCTAC CAGGACATGT TGATACGGTC
TCACCAGCAA CGCACGACAT ACATGTTGTA GAAAACAATA TGAGTGATCA GACTTCAATC
AGTATTCATG TCTATGGTGG CAACATTGGA CGTATACATC GCTCAGTCTT TGACCCCTCC
ACTGGAGCAG AAAAATTTTT TGTTTCTGGC TACGCAAATA CCTTTGTACC GAACCTCTGG
AATCCAGCGT AA
 
Protein sequence
MPHPQYYQQY LLYADPLDRF SVVSFVWGPG QKTPVHNHTV WGMVGQLRGE EKGTPYYRQA 
NGSFKAGESC INLPGHVDTV SPATHDIHVV ENNMSDQTSI SIHVYGGNIG RIHRSVFDPS
TGAEKFFVSG YANTFVPNLW NPA