Gene Pnec_0607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0607 
Symbol 
ID6183445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp526614 
End bp527027 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content43% 
IMG OID641671275 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_001797471 
Protein GI171463358 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0526] Thiol-disulfide isomerase and thioredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATTTA CAGATCTCGG TTTATCAGAG TCCACTCTTC GCGCTATTGC TGAAGAAGGT 
GTTGCAATCA ACTTTTGGGC CAGCTGGCGT GAACCTTGTC GCGAAGAATT TGAAGAGCTA
ACTCAACTAC AGGCAAACTA CGGACCCAAA GGGCTTGTTG TTTTAGCAGT GAATCTTGAT
GAAATAAAAC CACGCATTCT GCAATTTCTG AAAGGGAATG GCTTTTCAGA AAACAGCATT
GAAATATTGC TCAATCGCAA TAGTATTGTC TATAAGGCCT GGAGGGTCCG AGGCTTGCCA
ACCACTTTTC TTGTCAGCAG AGCTGGTAAG ATTGAAGGAG TATGGATGGG TACGATAGAA
AATATTGACA GCAATGAAGT CAAAGGGAAA ATAGAAACCC TTCTCCGCCA GTAA
 
Protein sequence
MLFTDLGLSE STLRAIAEEG VAINFWASWR EPCREEFEEL TQLQANYGPK GLVVLAVNLD 
EIKPRILQFL KGNGFSENSI EILLNRNSIV YKAWRVRGLP TTFLVSRAGK IEGVWMGTIE
NIDSNEVKGK IETLLRQ