Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0601 |
Symbol | |
ID | 6183450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 522624 |
End bp | 523451 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641671271 |
Product | hypothetical protein |
Protein accession | YP_001797467 |
Protein GI | 171463354 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACGCCT TTGGGCGCCC CCTTGCAAAG CAACTATCAG ACTCCATCGT GGTTGATAAC CGCGGTGGCG CCGGAGGGAC AGTGGATGCT GCAGCTGCAG CAAAAATGAC GCCAGATGGA TATACCTGGC TTCTTGGTGC GGTGCATCAT TCCATTGCGC CAAGCATGTA CAACAACCTC TCTTACGACA TCACTAAGGA TTTTGAACCC ATCGCCATTA TTGGCAGCGT TCCTCATGTC ATCGTAGTAA ACTCAAGCAA GTTTCCAAAA AATGATTTGA AGTCGATCAT GGAAGAGATT CGCAAGCATC CTGGCAAATA CAACTACGCA TCTACAGGCA ACGGCACCTC ACAGCATTTA ACAGGTGAAC TCTTTAAGAT ACAGAACAAG CTCTTCATTA CACACATTCC CTATCGTGGC ACAGGTCCAG CCCTGCAAGA TCTCGTTGCC GGTCAAGTAG ATATGATATT TGACACTCTT GCAGGCGCAG CACCGTTTAT TAAGAATGGT CAATTAATTG CCGTTGCAGT AGCAACTTCC AAACGAGTGG ATGCATTTCC TAACGTACCA ACCGCTCAAG AATTAGGAAT ATCCAATTTC ATCGTATCAA GTTGGTATGC CATGTGGGCT ATTAAAGGCA CGCCCAAAGA TATTGTTGAA AAAATGAGTA CTGAGGTGCA GATTGCACTC GCCTCTCCAG AAATCAAAGA ACGTTGGGCA GCCATGGGTG CAAGTGTTCC GAAGATGACG CGACCTGAGC TAGCAAACTA CATCAACCAA GAAATTACTC GTTGGGGGAA GTGGTTAAAA AGTCTGGTGC CAAATTAG
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Protein sequence | MDAFGRPLAK QLSDSIVVDN RGGAGGTVDA AAAAKMTPDG YTWLLGAVHH SIAPSMYNNL SYDITKDFEP IAIIGSVPHV IVVNSSKFPK NDLKSIMEEI RKHPGKYNYA STGNGTSQHL TGELFKIQNK LFITHIPYRG TGPALQDLVA GQVDMIFDTL AGAAPFIKNG QLIAVAVATS KRVDAFPNVP TAQELGISNF IVSSWYAMWA IKGTPKDIVE KMSTEVQIAL ASPEIKERWA AMGASVPKMT RPELANYINQ EITRWGKWLK SLVPN
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