Gene Pnec_0594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0594 
Symbol 
ID6183740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp518115 
End bp518816 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content44% 
IMG OID641671267 
Producthypothetical protein 
Protein accessionYP_001797463 
Protein GI171463350 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAATA CAGGAACGAT GGTTATTAAT CCTGCAATTT ATGCTAAATC ACCCTACGAC 
ACCCTAAAAG ATTTTCAGCC GGTTGCAAGA ACGGCACAGC AATCCCTTGC ATTAATTGTG
AATAAGGATG TTCAGGCCAA TACTCTCAAA GAGTTTGTTG CTTATGCAAG AGCAAATCCA
GGTAAATTGA ATTATGGTTC TGCTGGTAAT GGCGGTATCT CTCACCTGGT TCCAGAAATG
CTTAAAAGTG AAACTGGGAT ATTCATGGTG CATATTTCCT TTAAAGGAAG TGCACCTGCT
TTTACTGATT TGATTGCGGG ACATGTGCAG TTTATGGCGG AGTCCGTTCC GCAAGCAGCA
AATTACGCCA AACAGGGAAA GGTAAAGGCT CTAGCTGTTA CTAGTGCCAA GCGCAATCCT
GCCTTGCCAA ATACTCCTTC TGTTATTGAA ACCGGTGTTG CTAATTTGGA TGTAGTAGGT
TTCTATGGAA TTTTGGCGCC AAAGGGTACT CCGCTTGAAG TTGTTGGTGA ATTAGGCCAG
GCCTTTAAAG AGACCTTAGA GTCGCCTGAC ATTCAGAAAA AAATGATTGA TCAGGGCGCT
GACCCCGCAT ATTTAAATCC AGATCAGTTT GCTAAATTTC TTACTACAGA GATGCCGCGC
TGGGCAAAAG CAGTGAAGCA GGCTGGAGCA AAGCTCGACT AA
 
Protein sequence
MANTGTMVIN PAIYAKSPYD TLKDFQPVAR TAQQSLALIV NKDVQANTLK EFVAYARANP 
GKLNYGSAGN GGISHLVPEM LKSETGIFMV HISFKGSAPA FTDLIAGHVQ FMAESVPQAA
NYAKQGKVKA LAVTSAKRNP ALPNTPSVIE TGVANLDVVG FYGILAPKGT PLEVVGELGQ
AFKETLESPD IQKKMIDQGA DPAYLNPDQF AKFLTTEMPR WAKAVKQAGA KLD