Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0594 |
Symbol | |
ID | 6183740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 518115 |
End bp | 518816 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641671267 |
Product | hypothetical protein |
Protein accession | YP_001797463 |
Protein GI | 171463350 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAATA CAGGAACGAT GGTTATTAAT CCTGCAATTT ATGCTAAATC ACCCTACGAC ACCCTAAAAG ATTTTCAGCC GGTTGCAAGA ACGGCACAGC AATCCCTTGC ATTAATTGTG AATAAGGATG TTCAGGCCAA TACTCTCAAA GAGTTTGTTG CTTATGCAAG AGCAAATCCA GGTAAATTGA ATTATGGTTC TGCTGGTAAT GGCGGTATCT CTCACCTGGT TCCAGAAATG CTTAAAAGTG AAACTGGGAT ATTCATGGTG CATATTTCCT TTAAAGGAAG TGCACCTGCT TTTACTGATT TGATTGCGGG ACATGTGCAG TTTATGGCGG AGTCCGTTCC GCAAGCAGCA AATTACGCCA AACAGGGAAA GGTAAAGGCT CTAGCTGTTA CTAGTGCCAA GCGCAATCCT GCCTTGCCAA ATACTCCTTC TGTTATTGAA ACCGGTGTTG CTAATTTGGA TGTAGTAGGT TTCTATGGAA TTTTGGCGCC AAAGGGTACT CCGCTTGAAG TTGTTGGTGA ATTAGGCCAG GCCTTTAAAG AGACCTTAGA GTCGCCTGAC ATTCAGAAAA AAATGATTGA TCAGGGCGCT GACCCCGCAT ATTTAAATCC AGATCAGTTT GCTAAATTTC TTACTACAGA GATGCCGCGC TGGGCAAAAG CAGTGAAGCA GGCTGGAGCA AAGCTCGACT AA
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Protein sequence | MANTGTMVIN PAIYAKSPYD TLKDFQPVAR TAQQSLALIV NKDVQANTLK EFVAYARANP GKLNYGSAGN GGISHLVPEM LKSETGIFMV HISFKGSAPA FTDLIAGHVQ FMAESVPQAA NYAKQGKVKA LAVTSAKRNP ALPNTPSVIE TGVANLDVVG FYGILAPKGT PLEVVGELGQ AFKETLESPD IQKKMIDQGA DPAYLNPDQF AKFLTTEMPR WAKAVKQAGA KLD
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