Gene Pnec_0588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0588 
Symbol 
ID6183595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand- 
Start bp513979 
End bp514602 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content43% 
IMG OID641671261 
Productextracellular solute-binding protein family 3 
Protein accessionYP_001797457 
Protein GI171463344 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTATGGGA TCACGATTGA TATTGCTCAT GAGATTGGAA AGCAAACCTC TCTTCCGGTA 
GAGCTTGTCC CCTTTAAAAC CGCTGGCGCA ACTGTTGATG CAGTAAAAAC CGGAGATATC 
GATTTAGTAT TTGTGGCAAT CGATCCAGTT CGTGGTGCTG ATATTAGCTA TACCCCAGTC 
TATATTCAAA TCGAAGGGGC TTATATGGTT AAAACTGCTT CACCATTAAA GGACAATGAA 
GAGGTTGACG TCACGGGTAA TGAAATCGTC GTTGGCAAAG GAAGTGCCTA TGACCTTTAT 
TTAACTCGTG AGATTAAAAA CGCCACTCTC TTGCAAGCAG CTAGCTCTCA AGCTATTGTA 
GATGACTTTA TGTCAGGACA AGGAAATGTA GCGGCAGGGG TAAAGCAACA ACTGGAAAGT 
GATGCAAAAC GCTACGAAGG ATTGCGCATG CTACCTGGGC GCTTTATGGT AATCAATCAA 
GCTATTGGCA TTCCGAAAGC CCACTCAGGC TATGAGAGCA CAACCGCTTA TTTAAGTAAT 
GTCATCTCCG AATTGAAACA ATCTGGATTT ATAGCGGATG CTATGAAGCG TCACAATATT 
CAAGGCGCAA AAGTAGCAGA ATAA
 
Protein sequence
MYGITIDIAH EIGKQTSLPV ELVPFKTAGA TVDAVKTGDI DLVFVAIDPV RGADISYTPV 
YIQIEGAYMV KTASPLKDNE EVDVTGNEIV VGKGSAYDLY LTREIKNATL LQAASSQAIV 
DDFMSGQGNV AAGVKQQLES DAKRYEGLRM LPGRFMVINQ AIGIPKAHSG YESTTAYLSN 
VISELKQSGF IADAMKRHNI QGAKVAE