Gene Pnec_0582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0582 
Symbol 
ID6183000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand- 
Start bp509537 
End bp510121 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content45% 
IMG OID641671257 
Producthypothetical protein 
Protein accessionYP_001797453 
Protein GI171463340 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTTT GGAATGAGAT TCTTCCAACT GTTCGCACAC AACCTACTGC CCCCATTGCA 
CTAGTAGCTT CTGGCGTGAA TGATGTAATA AATTCCCAAG ACTATGTTCA AGCAGCATGG 
TGGAATCGTA TTCCCTACAC GGCCTGGTCA CTAATGACCG CAATCGCCCT CTGTGCCAAT 
CTACTCGTTG GTTTTGGTAC GCGCAATTAT GAGAAGAACA TTGGTCTATT CATGATCTTC 
CCTTTCGTTA TTTCAGTTTC TTTCTTTTTG ATTGCTGACA TCGACAGCCC AAGAGGCGGA 
ATCATTCGCA TCGAAACCAG AAACTTGGTG GCATTAAAAA ACAATCTCAC TCAGCAGATG 
GAAAATGCCA CTCCATCTTT AAAGGCGGTC CAAATGAAAC GTGTAGTGGA TGTTTTTAAA 
AATCGTGGTC GCGAATTGGT CTGGGCCTAT GTCATTCACC TACATAATGA TGAAGAACTT 
CACCCTGGCC AATTAGACTT TGAGATCGAA GCCCTGAGGC TCTCTCAGAT AGATAAACGC 
GGTATGGCCA ACGAACTGAG CGCCAAAGTC AGACTCAATA ACTGA
 
Protein sequence
MAFWNEILPT VRTQPTAPIA LVASGVNDVI NSQDYVQAAW WNRIPYTAWS LMTAIALCAN 
LLVGFGTRNY EKNIGLFMIF PFVISVSFFL IADIDSPRGG IIRIETRNLV ALKNNLTQQM 
ENATPSLKAV QMKRVVDVFK NRGRELVWAY VIHLHNDEEL HPGQLDFEIE ALRLSQIDKR 
GMANELSAKV RLNN