Gene Pnec_0580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0580 
Symbol 
ID6183504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp509007 
End bp509309 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content42% 
IMG OID641671255 
Productcytochrome b561 
Protein accessionYP_001797451 
Protein GI171463338 
COG category[C] Energy production and conversion 
COG ID[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.971319 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTGGT TGCTTTACAC TCTGCTTTTG GTATCACCTA TCTTTGGCAT CCTGTATTTT 
CAGTATGGCG GCAAAGAAAT CCACTTCTTC GGCTTAGTAT GGCCTCAGCT AGTTACACCC
AATCCAGAAA TGAAGAAAAC AGTTGAAGGG ATCCATAAGT TTCTTGGAAA CTCGCTCTAT
TTCTTGATCG CCATTCATGC CTTGGCAGGT TTATGGCAAC ATTACGTCCT AAAGGACGAT
ACACTTCGTC GAATGTTAAA TAAGGTGAAT GCCCAAACTG AAGCTGGAGC GAAGATTAAA
TGA
 
Protein sequence
MHWLLYTLLL VSPIFGILYF QYGGKEIHFF GLVWPQLVTP NPEMKKTVEG IHKFLGNSLY 
FLIAIHALAG LWQHYVLKDD TLRRMLNKVN AQTEAGAKIK