| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0575 |
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| Symbol | |
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| ID | 6183945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 505743 |
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| End bp | 506519 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641671250 |
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| Product | 3-hydroxybutyrate dehydrogenase |
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| Protein accession | YP_001797446 |
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| Protein GI | 171463333 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 78 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTACAT TAAAAGGTAA AACTGCTCTA GTCACTGGCT CAACTAGTGG TATTGGTTTG
GGAATGGCCA TTGCATTGGC AAAGCAAGGC GTCAATATTA TGGTGAATGG TTTTGGTGAA
AAGGGCGAAG CGATTGCCAA AATTAAAGCT TGCGGAGTAG AAGTGGATTA TCACGGCGCC
GATATGAGTA AGCCAAGTGA AATCGAAGAT CTCATTAAGC AAACAGAAAA GCGTTTTGGT
TCGCTTGATA TCTTAGTAAA CAATGCAGGT ATTCAATACA CTGCAAACAT TGAAGAGTTT
CCAACTGATA AGTGGGATGC GATCATTGCT ATTAACTTAA GCTCAGCATT TCATACTACG
CATCATGCAT TGCTTGGTAT GAAGAAACGT AACTGGGGCC GCATTATTAA TATCGCTTCA
GTGCATGGAT TGGTAGCATC TACTCAGAAG GCTGCCTATG TTGCTGCTAA GCATGGCATC
GTTGGCCTCA CTAAAGTAAC TGCTCTAGAA AATGCTCGCA CTGGTATTAC CTGTAATGCA
ATTTGTCCAG GCTGGGTTTT AACTCCACTC GTTCAAAAAC AGGTGGACGC TCGCGCTGAG
CGTGAGGGCA TTTCTAATGA GGCTGCGAAG ACTGCCTTAG TATCTGAAAA GCAGCCTTCA
GGTGAGTTTG TTAGCCCTGA GCAATTGGCA GTCTTGGCGG TATTTTTATG CGGGCCAGAT
GCTTCTGAGG TCCGTGGAGT AGCTTGGAAT ATGGATGGTG GCTGGACGGC TCAATAA
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| Protein sequence | MSTLKGKTAL VTGSTSGIGL GMAIALAKQG VNIMVNGFGE KGEAIAKIKA CGVEVDYHGA
DMSKPSEIED LIKQTEKRFG SLDILVNNAG IQYTANIEEF PTDKWDAIIA INLSSAFHTT
HHALLGMKKR NWGRIINIAS VHGLVASTQK AAYVAAKHGI VGLTKVTALE NARTGITCNA
ICPGWVLTPL VQKQVDARAE REGISNEAAK TALVSEKQPS GEFVSPEQLA VLAVFLCGPD
ASEVRGVAWN MDGGWTAQ
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