Gene Pnec_0574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0574 
Symbol 
ID6183995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp505109 
End bp505612 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content47% 
IMG OID641671249 
Producthypothetical protein 
Protein accessionYP_001797445 
Protein GI171463332 
COG category[S] Function unknown 
COG ID[COG1238] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCACA TGTTCGAACA TTTTTTTGCT TGGTTTGGAA TGCCGTCTGT CGGATTGCCG 
GCCGTATTTA TCAGTGCCTT CATCTCTGCT ACCTTAATAC CGGCAGGCTC AGAGCCAATT
CTATTTGGCT ACATTTCTAT TAATCCACAC TTATTTTGGG TTGCCATTAT GGTCGCCACG
GTTGGCAATA CATTGGGTGG AATGGTTGAC TGGTGGCTTG GGGTTATCGC GCGCAATAGT
TTTAAGTCAA TGGATGAGCC AAGCGATAGT CGCCTTAAGC GTTGGCTTGA AAATTGGGGT
CCCAAATTAT TGCTGTTGTC ATGGCTACCT GGATTTGGCG ATCCTTTGTG CTTGGCAGCG
GGTTGGTTGA AGCTGCCTTG GCAACCATGC CTCATCTACA TGTTTATTGG CAAGCTCCTG
CGCTTCATTA TGTTTACCTG GCTCCTAACT TTGGTGCCAG ACAGTTTTTG GCATCAGCTG
GGCCACTGGC TTCATATCAT CTAA
 
Protein sequence
MEHMFEHFFA WFGMPSVGLP AVFISAFISA TLIPAGSEPI LFGYISINPH LFWVAIMVAT 
VGNTLGGMVD WWLGVIARNS FKSMDEPSDS RLKRWLENWG PKLLLLSWLP GFGDPLCLAA
GWLKLPWQPC LIYMFIGKLL RFIMFTWLLT LVPDSFWHQL GHWLHII