Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0570 |
Symbol | |
ID | 6183607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 501635 |
End bp | 502387 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641671245 |
Product | Endonuclease/exonuclease/phosphatase |
Protein accession | YP_001797441 |
Protein GI | 171463328 |
COG category | [R] General function prediction only |
COG ID | [COG3568] Metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.98478 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 84 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTACAA GTAATTCTTC TCGCTTTACC GTTTTGAGTA TGAATGTTCA CAAAGGTTTA TCGCCTTTGC ATCGACACTC AACAATTTAT CAGTTGCGCG AAAAAATGCG TACCCACTAT CCAGACCTTC TTTTCTTGCA AGAACTGCAA CAGGAGCATC GGGGTAGGGT GCGCCGATTT GGACAGTGGC CGATGGCTGA ATTAACTCAT TTTTTATCAG AAGAATTTTG GCAGCACTGG CATTATGGAA AGAATGTCGA GTATCGTGAT GGCCATCATG GCAATGCCAT TCTCTCTAAG CATCCTCAAC AAAAGGGAAA TAACTACGAC ATATCTGCAT ATCGTTTTGA AAGTCGTGGG CTACTTCATA GTGTTACGAG AATAGATGGT GTGGATAAGT CCATTCATTG TTTTTGCGTG CATTTAGCAC TCTTTGAGCG AGGCAGAGAG CGGCAGTTGG AGGCAATCAT TGGCCACATT CAGGATTTGA CAGGTGGCGG CCCTACAATT GTTGCGGGAG ACTTTAATGA TTGGCGCAAC CGTGTGAGCG CGCCGATGAA AGCTGCAGGC TTTGATGAGG TTTTTGAAAT GCTTACCAGC TCTCCAGCAA AGACATTTCC GAGTGTCAAA CCACTGCTTC CTATGGACAG GATCTATGTC CGTGGTTTAA AAGTGCATTC TGCACAAATT TTGCATGAAT GGCTCAAGCT ATCAGATCAT CTGGGCATTA CCGCTGAATT GGAACTTGTA TGA
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Protein sequence | MGTSNSSRFT VLSMNVHKGL SPLHRHSTIY QLREKMRTHY PDLLFLQELQ QEHRGRVRRF GQWPMAELTH FLSEEFWQHW HYGKNVEYRD GHHGNAILSK HPQQKGNNYD ISAYRFESRG LLHSVTRIDG VDKSIHCFCV HLALFERGRE RQLEAIIGHI QDLTGGGPTI VAGDFNDWRN RVSAPMKAAG FDEVFEMLTS SPAKTFPSVK PLLPMDRIYV RGLKVHSAQI LHEWLKLSDH LGITAELELV
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