Gene Pnec_0570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0570 
Symbol 
ID6183607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp501635 
End bp502387 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content45% 
IMG OID641671245 
ProductEndonuclease/exonuclease/phosphatase 
Protein accessionYP_001797441 
Protein GI171463328 
COG category[R] General function prediction only 
COG ID[COG3568] Metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.98478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones84 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTACAA GTAATTCTTC TCGCTTTACC GTTTTGAGTA TGAATGTTCA CAAAGGTTTA 
TCGCCTTTGC ATCGACACTC AACAATTTAT CAGTTGCGCG AAAAAATGCG TACCCACTAT
CCAGACCTTC TTTTCTTGCA AGAACTGCAA CAGGAGCATC GGGGTAGGGT GCGCCGATTT
GGACAGTGGC CGATGGCTGA ATTAACTCAT TTTTTATCAG AAGAATTTTG GCAGCACTGG
CATTATGGAA AGAATGTCGA GTATCGTGAT GGCCATCATG GCAATGCCAT TCTCTCTAAG
CATCCTCAAC AAAAGGGAAA TAACTACGAC ATATCTGCAT ATCGTTTTGA AAGTCGTGGG
CTACTTCATA GTGTTACGAG AATAGATGGT GTGGATAAGT CCATTCATTG TTTTTGCGTG
CATTTAGCAC TCTTTGAGCG AGGCAGAGAG CGGCAGTTGG AGGCAATCAT TGGCCACATT
CAGGATTTGA CAGGTGGCGG CCCTACAATT GTTGCGGGAG ACTTTAATGA TTGGCGCAAC
CGTGTGAGCG CGCCGATGAA AGCTGCAGGC TTTGATGAGG TTTTTGAAAT GCTTACCAGC
TCTCCAGCAA AGACATTTCC GAGTGTCAAA CCACTGCTTC CTATGGACAG GATCTATGTC
CGTGGTTTAA AAGTGCATTC TGCACAAATT TTGCATGAAT GGCTCAAGCT ATCAGATCAT
CTGGGCATTA CCGCTGAATT GGAACTTGTA TGA
 
Protein sequence
MGTSNSSRFT VLSMNVHKGL SPLHRHSTIY QLREKMRTHY PDLLFLQELQ QEHRGRVRRF 
GQWPMAELTH FLSEEFWQHW HYGKNVEYRD GHHGNAILSK HPQQKGNNYD ISAYRFESRG
LLHSVTRIDG VDKSIHCFCV HLALFERGRE RQLEAIIGHI QDLTGGGPTI VAGDFNDWRN
RVSAPMKAAG FDEVFEMLTS SPAKTFPSVK PLLPMDRIYV RGLKVHSAQI LHEWLKLSDH
LGITAELELV