Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0566 |
Symbol | |
ID | 6183882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 499668 |
End bp | 500186 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641671241 |
Product | formate dehydrogenase, gamma subunit |
Protein accession | YP_001797437 |
Protein GI | 171463324 |
COG category | [C] Energy production and conversion |
COG ID | [COG2864] Cytochrome b subunit of formate dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 83 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGAT CATTTTCTAA AGTTCTACGC ACTTTGGTAG TGGCTGCTAG TTTGTCGCTG ACTTTGGCAA GTGGGATCAG TTTTGCTGAG CGCGCGCCGA TGGCGCCACT TCCGTCACCG AGCGGGGTGG ATGTTTCACC TTTGTCAGTG CCAGCAAATC CCAGTGCCTT GGCAAATGGA ACTCAAGCGC AGGCTCAGCC AGCAAACCCA TCGATTTTTA CTTCCGCGAA TAGCGATCCC TATAACTATG TCAGCATTCC AGACAAAGAA GCTAGCGTTT TAATTCAGCG CTCTGGTCAA CAGTGGCGTG TGATTCGTAA TGGTGTGATC ACTGTGTTCG GCGATTGGTT GCTCGCATTG GCATTTTTCG GGATTATTGC AACCTACACG CTCAAAGGCC CTATGAAGTT ACATGAGCCA ATGTCTGGTG TAAAGATTAA GCGCTTCAGT GCCTTTGATC GCCTAGTTCA CTGGTTGATG GCATTTAGCT TTTTAGCATT GGCTTTCACT GGCCAGTAG
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Protein sequence | MKRSFSKVLR TLVVAASLSL TLASGISFAE RAPMAPLPSP SGVDVSPLSV PANPSALANG TQAQAQPANP SIFTSANSDP YNYVSIPDKE ASVLIQRSGQ QWRVIRNGVI TVFGDWLLAL AFFGIIATYT LKGPMKLHEP MSGVKIKRFS AFDRLVHWLM AFSFLALAFT GQ
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