Gene Pnec_0551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0551 
Symbol 
ID6183037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand+ 
Start bp491466 
End bp492263 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content44% 
IMG OID641671229 
Producthypothetical protein 
Protein accessionYP_001797425 
Protein GI171463312 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.24318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAAAC GAGTCTTCCA GTTTTTAATC CTTGGCCTAG CCCTATTTTT GGCAGGGTGT 
GCTGACTTAG GTGGCGATTC AGTGCAAAAC GAAGCTGGCC AGCCGTTTAA TGCCGATCAG 
TTACCTGCTC AAGATGAGTT GCCCAAATTC TCTGCTGAGA CTGCCAGGGA TGGTATGCCT 
AATGGCTGGA ATTTTTACCG CATAGCGCCA TTTAAAAAGA ATACGGTTTA TCGCCTGGAA 
AACTATCAAG GCAAAACAGC GCTCAGCGCA AATTCCAGAA CATCCGCTTC TGGATTGGCG 
GTTAAATTGC GTCCCCGTCA AGCGGCAAAC TTATTGCTGC AATGGGAATG GAAGGCATTA 
AACCCAATCA TGAATGCTGA TAACGCCGAT AGTTATGCTG ATGATGCACC ATTACGTATC 
TTGGTTGCAT TCGATGGTAA TAAATCTAAA TTACCCTTAA AAGAAAAAAT GACTTTTGAG 
ATGGCTAATT TAATTAGCGG CCAAGAGATG CCCTATGCCA CGCTGATGTA TATCTGGTCC 
TGTAAATCCC CTGTCGGCAC AATCATTACC AATGCCCACA CTTCACGAAT CAAAATGATT 
GTGGTGGATT CTGGTTGGGA TAATTTGGGT CAGTGGCACA AACATCAACG AGATTTGGCT 
GCTGACTATA AGATGGCTTA TGGCGAGACC CCTGGCGAGG TGATTGGTAT TGCCTTGTTG 
ACTGATACCG ATAACACCAA ATCAGAAGCA CGCGCCTTTT ACGGTGATAT TGAATTGATT 
CGGAAGAATC CAAAATAA
 
Protein sequence
MLKRVFQFLI LGLALFLAGC ADLGGDSVQN EAGQPFNADQ LPAQDELPKF SAETARDGMP 
NGWNFYRIAP FKKNTVYRLE NYQGKTALSA NSRTSASGLA VKLRPRQAAN LLLQWEWKAL 
NPIMNADNAD SYADDAPLRI LVAFDGNKSK LPLKEKMTFE MANLISGQEM PYATLMYIWS 
CKSPVGTIIT NAHTSRIKMI VVDSGWDNLG QWHKHQRDLA ADYKMAYGET PGEVIGIALL 
TDTDNTKSEA RAFYGDIELI RKNPK