Gene Pnec_0544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0544 
Symbol 
ID6182951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand+ 
Start bp485322 
End bp485669 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content47% 
IMG OID641671224 
ProductSOUL heme-binding protein 
Protein accessionYP_001797420 
Protein GI171463307 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.301676 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACTG AAGAGCCGAA ATACACTGTT CTTGAAAAAG AGTCGCCTTT TGAGGTTCGG 
TCTTACGCTT CGATGATTAT GGCTGAAGTT GAAGTCGACG GGGATTTGGA TCAAGCCTCC 
AGTCAGGGAT TTCGTTTGAT TGCCGCGTAT GTATTCGGCC AGCATCAAGT GAGTGAAAAA 
ATTGCGATGA CGGCACCGGT GATGGTAGTT GACCAAACTG TGAAAAGTGC GAAGATTGCG 
ATGACTGCCC CCGTAGGAAT TGAGTCAAGC GCTGGTAAAT GGGTAGTGTC ATTTGTAATG 
TCTGCTGAGT ACACCATGGA GACCTTGCCA AAGCCAATGA ATTCTTAA
 
Protein sequence
MATEEPKYTV LEKESPFEVR SYASMIMAEV EVDGDLDQAS SQGFRLIAAY VFGQHQVSEK 
IAMTAPVMVV DQTVKSAKIA MTAPVGIESS AGKWVVSFVM SAEYTMETLP KPMNS