Gene Pnec_0541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0541 
Symbol 
ID6184416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp483520 
End bp483783 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content45% 
IMG OID641671221 
Product6-pyruvoyl tetrahydropterin synthase and hypothetical protein 
Protein accessionYP_001797417 
Protein GI171463304 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.609707 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGATC ACCCCGGTAA AGCAGATGAT GGCATGGTGC TGGATTTTGG CGATATCAAA 
CGCTTAACCA ATCAATACAT TGTTGATCTT TGGGATCATG CATTTTTGGT TGCCAAGGAA
GATGAGGGGT TGGTAGCCTT TTTGTCGACC CTGCCTAACC ACAAGACAGT GATTATGGAG
CATGTGCCAA CAGTAGAAAA TCTTGCAAAT GCTGCCTTTT CTATATTGAA GCCAGTGTTT
AGTAAGGCTT TGGTGGCTGC TTAG
 
Protein sequence
MADHPGKADD GMVLDFGDIK RLTNQYIVDL WDHAFLVAKE DEGLVAFLST LPNHKTVIME 
HVPTVENLAN AAFSILKPVF SKALVAA