| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0526 |
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| Symbol | smpB |
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| ID | 6184010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 474136 |
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| End bp | 474588 |
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| Gene Length | 453 bp |
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| Protein Length | 150 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641671207 |
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| Product | SsrA-binding protein |
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| Protein accession | YP_001797403 |
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| Protein GI | 171463290 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0691] tmRNA-binding protein |
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| TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 0.867775 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTATCG TCGATAACAA AAAAGCCTTC TTTGATTATT TTATCGAGGA GCGCTTTGAG
GCCGGACTTG TGCTGGAAGG CTGGGAAGTG AAAGCCATCC GCGCAGGCTG CGTGCACATT
AAAGAAGCGT ATGTCGTCAT TCGCAAGGCG GAGCTATTCC TGACTGGCTG CCATATCACC
CCCCTGCTAT CAACCTCAAC CCATATTGTT CCCAACAACA CCCGCACCAG AAAGCTCTTA
CTCAACGCCA TTGAGATCCG CAAACTGATT GGTAAGGTTG AGCAAAAAGG CTATACCCTC
GTTCCACTGA ACCTGCATTT CTCCAAGGGG AATGTGAAGT GCGAAATTGG CCTCGCTAGA
GGCAAAAAGC AGCATAACAA GCGAGCAGCC ACCAAAGAGC GAGAGTGGGA AGTGCAAAAA
GGCCGTATTG CCAGAGGCGA TTTAAACGCT TAA
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| Protein sequence | MSIVDNKKAF FDYFIEERFE AGLVLEGWEV KAIRAGCVHI KEAYVVIRKA ELFLTGCHIT
PLLSTSTHIV PNNTRTRKLL LNAIEIRKLI GKVEQKGYTL VPLNLHFSKG NVKCEIGLAR
GKKQHNKRAA TKEREWEVQK GRIARGDLNA
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