Gene Pnec_0524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0524 
Symbol 
ID6183010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp473408 
End bp473806 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content47% 
IMG OID641671205 
Productprotein of unknown function DUF299 
Protein accessionYP_001797401 
Protein GI171463288 
COG category[S] Function unknown 
COG ID[COG1806] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value0.850459 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACTTTG AGCTCAATTC TATTGTTGCA AAGGCTAATG GTCTCATTTT GGACATGTTT 
CAGACCTTCG TGGCCCCTCT TGAAGAAGCA TTGGGCATGA AATCCACTCA CGCCATGAAC
CGTCTACACC ACAATGCGGA CACCGAGGCT TACAAAAACC GTATTGAGGC GATTAACTAC
TCACTGGCCC ACGATGATGG CCAATCCAAT CAAAACCTAG CTGAAGTCGA CGTTATTCTG
ATTGGCATCT CCCGGGTGGG AAAAACACCA ACCAGCCTTT ATCTTGCAAT GCAATACGGA
CTCAAAGCAG CAAACTACCC ACTGATTCCG GAAGACTTTG AGCGCGGACA GCTGCCCAAG
GATTTAGTGC CTTATCACCA AAAAATCTTG GCCTCATGA
 
Protein sequence
MNFELNSIVA KANGLILDMF QTFVAPLEEA LGMKSTHAMN RLHHNADTEA YKNRIEAINY 
SLAHDDGQSN QNLAEVDVIL IGISRVGKTP TSLYLAMQYG LKAANYPLIP EDFERGQLPK
DLVPYHQKIL AS