Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0521 |
Symbol | rnhB |
ID | 6183002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 471741 |
End bp | 472334 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641671202 |
Product | ribonuclease HII |
Protein accession | YP_001797398 |
Protein GI | 171463285 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0164] Ribonuclease HII |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCATCA TTTGGGTCTG TGGGGTTGAT GAGGCCGGGC GTGGACCATT GGTTGGTGCA GTGGTAGCTG GTGCGGTAGT GTTAGATCCC AATAATCCGA TTGAAGGACT AAAGGATTCC AAGAAGTTAA CCGCTGCGCG TCGTGAGTAT CTCTACGAGC AGATTATGGA AAAAGCAAAA GCCTGGGGTG TTGGTGAGGC CAGCCCAACA GAGATTGATG AGATTAATAT TCTGCAGGCT ACTATGTTGG CAATGCGAAG GGCCATTGAA GATCTGGCGA CTCGATTGGG TGCTTGGCCT GATAAAGCAT TGATTGATGG TAATCGTTGT CCAGAGCTGC CCATTGCTGC GGAAGCAATT ATCAAGGGTG ATACTAAAGA GCCAGCAATA TCGGCTGCCT CAATTGTGGC CAAGGTAACG CGTGACCGCC AGATGATGTC TTTGCATGAG CGCCATCCTG AGTATGGTTT TGCTCAGCAC ATGGGCTATC CAACCGAAGC CCATTTTGCA GCGCTCAAAC AATATGGAGC GTGTGATCAG CATAGACGAT GCTTTTCACC GGTACGAAAA GCTCTCGAAT CTGTTGCAAG TTAA
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Protein sequence | MSIIWVCGVD EAGRGPLVGA VVAGAVVLDP NNPIEGLKDS KKLTAARREY LYEQIMEKAK AWGVGEASPT EIDEINILQA TMLAMRRAIE DLATRLGAWP DKALIDGNRC PELPIAAEAI IKGDTKEPAI SAASIVAKVT RDRQMMSLHE RHPEYGFAQH MGYPTEAHFA ALKQYGACDQ HRRCFSPVRK ALESVAS
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