Gene Pnec_0521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0521 
SymbolrnhB 
ID6183002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp471741 
End bp472334 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content49% 
IMG OID641671202 
Productribonuclease HII 
Protein accessionYP_001797398 
Protein GI171463285 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCATCA TTTGGGTCTG TGGGGTTGAT GAGGCCGGGC GTGGACCATT GGTTGGTGCA 
GTGGTAGCTG GTGCGGTAGT GTTAGATCCC AATAATCCGA TTGAAGGACT AAAGGATTCC
AAGAAGTTAA CCGCTGCGCG TCGTGAGTAT CTCTACGAGC AGATTATGGA AAAAGCAAAA
GCCTGGGGTG TTGGTGAGGC CAGCCCAACA GAGATTGATG AGATTAATAT TCTGCAGGCT
ACTATGTTGG CAATGCGAAG GGCCATTGAA GATCTGGCGA CTCGATTGGG TGCTTGGCCT
GATAAAGCAT TGATTGATGG TAATCGTTGT CCAGAGCTGC CCATTGCTGC GGAAGCAATT
ATCAAGGGTG ATACTAAAGA GCCAGCAATA TCGGCTGCCT CAATTGTGGC CAAGGTAACG
CGTGACCGCC AGATGATGTC TTTGCATGAG CGCCATCCTG AGTATGGTTT TGCTCAGCAC
ATGGGCTATC CAACCGAAGC CCATTTTGCA GCGCTCAAAC AATATGGAGC GTGTGATCAG
CATAGACGAT GCTTTTCACC GGTACGAAAA GCTCTCGAAT CTGTTGCAAG TTAA
 
Protein sequence
MSIIWVCGVD EAGRGPLVGA VVAGAVVLDP NNPIEGLKDS KKLTAARREY LYEQIMEKAK 
AWGVGEASPT EIDEINILQA TMLAMRRAIE DLATRLGAWP DKALIDGNRC PELPIAAEAI
IKGDTKEPAI SAASIVAKVT RDRQMMSLHE RHPEYGFAQH MGYPTEAHFA ALKQYGACDQ
HRRCFSPVRK ALESVAS