| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0515 |
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| Symbol | |
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| ID | 6182999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 465271 |
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| End bp | 467616 |
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| Gene Length | 2346 bp |
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| Protein Length | 781 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641671196 |
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| Product | outer membrane protein assembly complex, YaeT protein |
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| Protein accession | YP_001797392 |
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| Protein GI | 171463279 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 0.404864 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAATTCTC TGACATCATC GTTCCGTATT TTTGCTCGCC TCATTGCTCA TATCCTGGTT
TTGTTTGCGC TAGGTTTGAG TTTGAATGCT TCTGCGGCTG ATTCTTTTGT GGTGAAGGAT
ATTCGCGTTG AAGGTCTGCA GCGTGTAGAG CCTGGCACGG TATTTAGTTA TTTGCCTGTT
CAAGTTGGTG ACACCTTTAC CGAAGAAAAA GGTGCCGATG TTATTAAGGC CCTCTATAGC
ACTGGTTTTT TTAGAGACGT TCAGATTCAG GCGCAGGGTG CTGTATTGAT TGTGATCGTT
AAGGAGCGCC CAACGATATC CCGTATTGAA TTTACAGGGA TGAAAGAGTT TGATAACGAG
ATCGTTCGTA AATCTTTAAA AACAGTCGGC GTGGCCGAAG CTCGTTTTTA CGACAAGGCC
CTGATCGATA AGGCCGAGCA AGAATTAAAG CGTCAATATG TTGGTAAAGG TATGTATACA
GCAGAAGTGG TTGCTACCGT TACTCCAGTT GAGCGCAATC AAGTGGCAAT TTACTTCAAT
ATTGATGAAG GCCCTGTTGC CAAAATTCAA GAAATTAATT TCATTGGTAC CGAGGTATTT
AGCGAGAGCA CCCTGAAAAG CGAAATGCAA CTCAAGACCG GCGGATGGCT GTCTTGGTAC
AGCAAAGACA ATCTTTACTC TAAGCAAAAA TTAACTGCCG ACTTAGAATC TATTCGATCT
TACTATCTGA ATCGTGGTTA TCTCGAGTTT GTGATTGAGT CAACCCAGGT TTCGATTACT
CCGGATAAGA AAGGCGTCTA TCTCACTATC AGCGTTCGTG AGGGCAAGAA ATTCACCGTT
AAGGATGTTC GCTTAGCGGG AGAAACTCTT GGTAAAGAAG CCGAGTTAAT GCAGTTGATT
GTTTTAAAAC CAGGAGACAC TTTCTCAACA GCTCGTTTGA CTGAGAGTAC AAAGGCGATT
GCTGAGGTTT TGGGTTCTTA TGGTTACGCT TTTGCAACCA TTAATTCGCA ACCCGATCTT
CGTCGCGATC TGTCAGAAGT CGATCTAACT TTGGTTGTCG ATCCAGGTCG TCGTATCTAC
GTTCGCCAGG TAGCCATTTC AGGTAACGCC AAGACTCGTG ATATGGTAAT CCGTCGTGAA
ATGCGTCAGT TTGAAAGCTC ATGGTTTGAT AGTGACAAGA TTGACTTATC TAAAAAGCGT
TTAGGACGCT TGGGCTATTT TACTGAGACA GATATCACTA CAGAAGATGT TCCTGGATCT
CCTGACCAGG TTGACGTTAA TGTGAAGGTG ACAGAAAAGC CAACTGGAGC AATCACGCTT
GGTGCCGGCT TCTCCTCAAC TGAAAAATTG ATTTTGTCTG CAGGTATTAA CCAAGACAAC
GCATTTGGTA CGGGTACTGC GATTGGTTTG AATGCGTCTT TGGGTAAGAT TACTCAAAAC
TTAACTCTTT CTAACTACGA TCCGTATTTC ACAGAAGATG GTATTAGTCG CTACACAGAC
TTGTACTATC GTTCATCCAA GCCTTTGTAC TATGTTGGCG ATCCTGATTA TCAAATTAAA
TCGGTAGGCT CCAATATTAA GTTTGGCGTT CCTTATACTG AAGTTGATCG TGTTTTCTTT
GGTACTGGTA TTGAGGCCTT TCAGATTAAA ACAACGGTTA ATACACCGCA GCCTTATCTG
ACTTATGCAC AAAGCTATGG TATTCCTGCT CCAGGATATC CCGATACCTT AAATACTTAC
AACATTCCAG TTGCTGTGGG ATGGGCGCGC GATGGTCGCG ATAGCTCTTT AATACCGTCA
ACCGGATCAT TGGAGCAATT ATCGGGAGAG GTGGGTACTC CAGCCGGTAA CATGAATTTT
TACCGACTGT ATGGTCAGTA TCAAAAGTAC CATTCCTTCT CTAAGGGAAA TATCTTGTCT
TTTAACGGCG AGGTTGGTTA TGGTCAGGGC TACGGAAATC ATCCTTTCCC AATTACCAAA
AACTACTATG TGGGTGGTAT TGGCTCAGTT CGTGGCTACT CCCCAGGTTC GCTTGGTCCA
ACCTATCAAA ACATCAATGG TCAAATTCTG CCAACAGGCG GCCAATCTAA GATTGTTAGT
AATTTAGAGT ACACATTCCC GGTTCCGGGC TCTGGTGTTG ATAAGACCCT GCGCCTCTTT
ACCTTCGTGG ATGGCGGTAA TGCCTTTGGG CAAAATATCA ATCTAGTTTT GCGATACTCC
TATGGATTGG GTTTATCATG GATATCACCA CTGGGGCCTT TGAAGTTCAG CTATGGCATT
CCGTACAAGT CGCAACCAAC GGACAATATC CAGCGTTTAC AGTTCCAAGT GGGAACAGCG
TTTTAA
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| Protein sequence | MNSLTSSFRI FARLIAHILV LFALGLSLNA SAADSFVVKD IRVEGLQRVE PGTVFSYLPV
QVGDTFTEEK GADVIKALYS TGFFRDVQIQ AQGAVLIVIV KERPTISRIE FTGMKEFDNE
IVRKSLKTVG VAEARFYDKA LIDKAEQELK RQYVGKGMYT AEVVATVTPV ERNQVAIYFN
IDEGPVAKIQ EINFIGTEVF SESTLKSEMQ LKTGGWLSWY SKDNLYSKQK LTADLESIRS
YYLNRGYLEF VIESTQVSIT PDKKGVYLTI SVREGKKFTV KDVRLAGETL GKEAELMQLI
VLKPGDTFST ARLTESTKAI AEVLGSYGYA FATINSQPDL RRDLSEVDLT LVVDPGRRIY
VRQVAISGNA KTRDMVIRRE MRQFESSWFD SDKIDLSKKR LGRLGYFTET DITTEDVPGS
PDQVDVNVKV TEKPTGAITL GAGFSSTEKL ILSAGINQDN AFGTGTAIGL NASLGKITQN
LTLSNYDPYF TEDGISRYTD LYYRSSKPLY YVGDPDYQIK SVGSNIKFGV PYTEVDRVFF
GTGIEAFQIK TTVNTPQPYL TYAQSYGIPA PGYPDTLNTY NIPVAVGWAR DGRDSSLIPS
TGSLEQLSGE VGTPAGNMNF YRLYGQYQKY HSFSKGNILS FNGEVGYGQG YGNHPFPITK
NYYVGGIGSV RGYSPGSLGP TYQNINGQIL PTGGQSKIVS NLEYTFPVPG SGVDKTLRLF
TFVDGGNAFG QNINLVLRYS YGLGLSWISP LGPLKFSYGI PYKSQPTDNI QRLQFQVGTA
F
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