| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0514 |
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| Symbol | |
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| ID | 6184475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 464141 |
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| End bp | 465274 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641671195 |
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| Product | membrane-associated zinc metalloprotease |
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| Protein accession | YP_001797391 |
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| Protein GI | 171463278 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 0.30248 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCAGGCGC TAATTACTTT CGCCGCATTC TTGCTAACTC TAGGGGTGTT GGTTAGCTTT
CATGAGTTTG GACATTTTTT AGCGGCTCGT TGTTGTGGAG TTCGAGTGCT TCGATTCGCG
ATTGGTTTTG GTAAACCAAT TTATACCTAC CGTGCTAAAA ATAAAACGGA GTGGGTATTG
GCTTCAATCC CATTGGGTGG ATATGTCAAG TTGCTGGATG GGCGAGATCG TCAGCAGGTC
ATTTCCCCCG CGGATGAGGC TGAGGCTTTC GATAGGAAGC CACTTTGGCA GCGTTCTTTG
GTGGTCGCAG CCGGACCCTT TGCCAATTTT TTCCTTGCTG TTATTTTCTT TGCCTTGATC
TACCTATCGG GCGCCCCTCA ATTGCCAGCT GTTTTGCAAA ATCCCCCTGA AAATTCTGTA
GCAGCTAATT TAGGGATTGC AGAAGGGGAT CAAGTGATTG GTTGGCAGGA TTTGGGGTCG
CAAACAGAGA ATATGCTCCT TTTTGGTGAA TTTGAGCTGG TTCCGAGCTG GAATGCCCTG
CGCTGGAGTC TGATGGATGC ACTTACCGCC GAGGATGGGT TTGCGTTGGA GCTCCAAACT
CCGGCAGGTG GGCGCCATGT AAAGACCTTT TACGCCAAAG ATTTGCCCAA AATCAGCTCT
GATAAGGACG TTATGAAGGC ACTTGGTTTG CTGCCAGCTC CCACCCCTCT GGATCATTGG
CAAGAGCTCA AGCTAGGGCC AATTGATGCG CTGACATTTG CATCGCAAAG GGTGTGGGTA
ATAACCAAGG TTTCAGCAAG AATGATGGCT GGCTTATTAA CAGGTAGCAC CTCTTTAAAA
CAGCTTGGTG GGCCCCTCAG TATTGCGGAT ATGGCTGGCA AGACTGCTCA AGTAGGGTGG
CAGCCATTTT TAGCCTTTTT AGCACTTATG AGCATTAGTA TTGGCCTGCT GAATTTGCTC
CCTTTTCCGA TGCTTGATGG GGGTCAGCTC CTGTATGATG CATGGGAGTT AGTCGCCGGT
AAGCGGATTT CGATATCAAT GCAGGAACAG CTCCAAAAGC TGGGCTTTAT TTTGCTGATT
TCTATGTCAT TACTGGCATT GTTTAACGAT TTACAACGCT ATATTTCGCC TTGA
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| Protein sequence | MQALITFAAF LLTLGVLVSF HEFGHFLAAR CCGVRVLRFA IGFGKPIYTY RAKNKTEWVL
ASIPLGGYVK LLDGRDRQQV ISPADEAEAF DRKPLWQRSL VVAAGPFANF FLAVIFFALI
YLSGAPQLPA VLQNPPENSV AANLGIAEGD QVIGWQDLGS QTENMLLFGE FELVPSWNAL
RWSLMDALTA EDGFALELQT PAGGRHVKTF YAKDLPKISS DKDVMKALGL LPAPTPLDHW
QELKLGPIDA LTFASQRVWV ITKVSARMMA GLLTGSTSLK QLGGPLSIAD MAGKTAQVGW
QPFLAFLALM SISIGLLNLL PFPMLDGGQL LYDAWELVAG KRISISMQEQ LQKLGFILLI
SMSLLALFND LQRYISP
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