| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0512 |
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| Symbol | |
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| ID | 6184437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 462130 |
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| End bp | 462957 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641671193 |
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| Product | phosphatidate cytidylyltransferase |
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| Protein accession | YP_001797389 |
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| Protein GI | 171463276 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0575] CDP-diglyceride synthetase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.248492 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 0.282224 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAAAA CTAGAATCAT TACCGCCCTT GTCTTGTTGG CGGTACTACT GCCTATCCTA
TTCTTGCTCC CCCCGATTTA TATTGGTGGC TTTTTTTTGG TGGCTTTATT GGCTGCTGCT
TGGGAGTGGA GCCGATTGCT TGCGCCTGAG GCAGGACGCG CTGCTTGGAT ATATGCATTA
TTTTGTTTGG CCATTATTTT GTTTTTGCTT GGCATGCAAA ATGCCTCCTG GCAGTTTGCT
TTATTGCTGC TAGCAGTCAT ATTCTGGTTC TTTGTAGCAC CATTTATATT GGCCAAAGGC
ATGAATTTGA CTTTACAAAA GTTGCGCCCT TTTTACGTCG TACTCGGCTT AATTTTGTTG
CCAGCAACTT GGATTGCATT GGTGTTCTTA AGAGAGCTTG GGCTTATCTT TTTGCTCAGT
GCGATGGCCC TTGTATGGGT GGCTGATATC GGCGCCTACT TTGTTGGTAA AGCATTTGGC
AAGCACAAGC TTGCGGTGCA AATTAGCCCT GGAAAATCGA TTGAAGGCGC AGTTGGCGGC
CTAATACTTT GTTACGTTTA TGCATTCTCA TGCGTTTACT TTTTATCCTT TGAATCTACT
TTATTCGGTG CATGGGCCAT CCGTTTTGGA TGGGTTCCTA TGTTCATGAT GGTGACGGTC
TTAGCGGCTT TCAGTATTTT TGGGGACTTA TTTGAGTCTC AGTTAAAGCG CTTGGCAGGA
GTAAAGGATT CCAGTCATTT ATTGCCAGGT CATGGCGGTG TGTTAGATCG CGTTGATGCT
TTGATACCAA CGATGCCAAT TGCAGCACTC CTAGCGGGAT TTGTGTGA
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| Protein sequence | MLKTRIITAL VLLAVLLPIL FLLPPIYIGG FFLVALLAAA WEWSRLLAPE AGRAAWIYAL
FCLAIILFLL GMQNASWQFA LLLLAVIFWF FVAPFILAKG MNLTLQKLRP FYVVLGLILL
PATWIALVFL RELGLIFLLS AMALVWVADI GAYFVGKAFG KHKLAVQISP GKSIEGAVGG
LILCYVYAFS CVYFLSFEST LFGAWAIRFG WVPMFMMVTV LAAFSIFGDL FESQLKRLAG
VKDSSHLLPG HGGVLDRVDA LIPTMPIAAL LAGFV
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