| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0511 |
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| Symbol | |
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| ID | 6184352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 461330 |
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| End bp | 462103 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641671192 |
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| Product | undecaprenyl diphosphate synthase |
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| Protein accession | YP_001797388 |
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| Protein GI | 171463275 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
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| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0663424 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 0.27617 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCAAC ACACCAGTTC AACCCTAGCC ATTCCAGAGG TCAGTGCTGT ACCTCGCCAT
GTGGCGATCA TCATGGATGG TAATGGGCGC TGGGCTAGCA AACGGATGAT GCCACGCGTT
GCTGGGCATT CTGAAGGATT GAGTGCTGTT CGTAAAATTG TTCAAGAATG TCGCAAGCTT
GGGGTGGAGT ATTTAACGGT ATTCGCCTTC AGTTCTGAGA ACTGGCGACG TCCACCAGAA
GAGGTGGGCT TCTTGATGAA GCTGTTTCTC AAATCGCTGA AGGGCGAAGT ATCCCGTCTT
GCTGAAAACG ATATTGCCTT GCGATTAATT GGCGACCTAA GCCGTTTTAA TTCCGCTATT
CAAGAGATGG TAGAGTTTTC TGAGAAAAAA ACAGCTGGTT GCAAGGGCCT GACTTTTACT
ATTGCCGCGA ACTATGGTGG GCGCTGGGAT ATCTTGCAAG CAATGCGCCA ATGCCTTGTG
GCTAATCCTA ACCTAAAACC AGAGCAGGTA AGCGAAGAGT TGTTGCAGCC GCATCTTTCA
ATGGCATATG CACCTGAGCC GGATTTATTT ATTCGCACCG GTGGCGAGCA ACGCATAAGC
AATTTCTTGT TGTGGCAGTT AGCCTACACG GAACTGTATT TCACAGATAT CTTGTGGCCT
GACTTTGATG AAAAGGAATT ACACAAAGCG TTTGACTGGT TTAGCCAGCG CGAGCGCCGC
TTTGGTCGTA CCAGTGCTCA GCTTGTATCG CAAGCAACGA GCGATGCAGT TTAA
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| Protein sequence | MTQHTSSTLA IPEVSAVPRH VAIIMDGNGR WASKRMMPRV AGHSEGLSAV RKIVQECRKL
GVEYLTVFAF SSENWRRPPE EVGFLMKLFL KSLKGEVSRL AENDIALRLI GDLSRFNSAI
QEMVEFSEKK TAGCKGLTFT IAANYGGRWD ILQAMRQCLV ANPNLKPEQV SEELLQPHLS
MAYAPEPDLF IRTGGEQRIS NFLLWQLAYT ELYFTDILWP DFDEKELHKA FDWFSQRERR
FGRTSAQLVS QATSDAV
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