| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0507 |
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| Symbol | rpsB |
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| ID | 6184598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 458202 |
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| End bp | 458951 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641671188 |
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| Product | 30S ribosomal protein S2 |
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| Protein accession | YP_001797384 |
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| Protein GI | 171463271 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0052] Ribosomal protein S2 |
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| TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0347407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 0.480774 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAGTAA CTATGCGTCA AATGCTGGAA GCCGGTTGCC ATTTTGGTCA CCAAACTCGC
TTCTGGTCAC CAAAGATGGC CCCATTTATT TTCGGTCATC GCAACAAAAT CCACATCATC
AACTTGGAAA AAACATTGCC AATGTTTCAG GACGCCCTGA AATTTACAAA ACAAGTTGCT
GCTAATCGTG GCACGATTTT ATTTGTTGGT ACTAAGCGTC AATCACGCGA GATCATTGCT
GAAGAAGCTG CTCGTGCTGG TATGCCTTAC ATCGACAGCC GTTGGTTGGG CGGTACGCTC
ACCAACTTCA AAACTGTTAA AGGTTCCCTC AAGCGTTTGA AAGATATGGA AGTTGCCAAA
GAAGCTGGCG ACTGGGAAAA GCTTTCTAGG AAAGAGGCTT TGACTAATGA CCGTGATCTC
GACAAATTGC AAAAAGCGCT TGGCGGTATT AAAGATTTGA ATGGCATTCC TGATGCGATT
TTTGTAGTAG ACGTTGGCTA TCACAAGATT GCTATCACTG AAGCTAATAA ATTAGGTATT
CCAGTTATCG CTGTTGTAGA TACTAACCAC TCACCAGAAG GCGTTGATTA CATCATCCCT
GGTAACGATG ACTCAAGCAA AGCAGTAATT CTCTATGCGC ACGGCATTGC TAACGCAATC
CTCGAAGGTA AGGCTAACTC TGTACAAGAA ATTTTGACAG CAGTTAAAGA GGGTGAAGAA
GAGTTTGTTG AAGAAGGGAA AGTTGAATAA
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| Protein sequence | MSVTMRQMLE AGCHFGHQTR FWSPKMAPFI FGHRNKIHII NLEKTLPMFQ DALKFTKQVA
ANRGTILFVG TKRQSREIIA EEAARAGMPY IDSRWLGGTL TNFKTVKGSL KRLKDMEVAK
EAGDWEKLSR KEALTNDRDL DKLQKALGGI KDLNGIPDAI FVVDVGYHKI AITEANKLGI
PVIAVVDTNH SPEGVDYIIP GNDDSSKAVI LYAHGIANAI LEGKANSVQE ILTAVKEGEE
EFVEEGKVE
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