Gene Pnec_0502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0502 
Symbol 
ID6184582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand+ 
Start bp450904 
End bp451962 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content46% 
IMG OID641671184 
ProductZipA FtsZ-binding region 
Protein accessionYP_001797380 
Protein GI171463267 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGT TGGGCTTGTC TGATTTGCAG TTGGCGCTGG CCGTTATTGG TTTATTGATA 
TTAATAGCCG TAGCTATTCT GAATATTAAG TATGCTCGTG CTTGCCGTAA GGCAAAAGAA 
CAAGGTGAAT ATGCCTTGGA TGATCGCTTC GCACGTGAGC CCAGCTTTGG TCAGGGCTTT 
GCAGATGTTG GTGTTGCTGG CAGAGTAGAG CCGAGTTTTG GAGAGGCTCA GCCAACAACG 
ATTTCAGCCC CTGAAAAATT TGCAATTGAC CCACGCATTG ATTGCGTCAT CACACTTCGA 
TTTGATGAGA GTATTAGTGG CGCAGAAATT CTGAATGAAA TTCATGCATG GACTGATCTC 
GAGGCGCAAT CGACTGCTCG ATGGATGTGT GAAGGTCTAA ATGCCAACCT TGATGTTGCT 
GAAGATTGGG AGGAGCTCCA TCCCGACTCC ACATACTCTG ATTTGCAGCT GGCTATTCAG 
TTGGCTAGTC GCAAAGGCCC TATTGGTGTT TTAGAACTTT CTGACTTTTG TTCACGTGCT 
CAAGCGCTTG CCGAGACTTT GGGCTCGCAA ATCGATATGC CTAGCGTCAG CACTATGTTG 
GAAGGTGCTA AAGAATTAGA TGTGATGGCT GCAGAGAGTG ATATTCAATT GAGTATCAAT 
GTGTTGTTTG ATGAGTCATG TCCTTGGGGT AATTTCGATG CACTGATGCG TCAGCGTGGT 
TTTAAGTTAT CTCGCAACGG ACGTCAGTAT GAATACCTCA GTAAAGGCAT AGTGCTTTTC 
AACAGTGCCG ACTTAGATCC GAACAAGACC GTCACTCAGG TGACTCTATT GTTGGAAGTT 
CCTTTGGTTC CACAGGAAGA GCGTGCATTT GAGAGGATGT TGTCGGAAGG TGTTGAGATT 
GCTCAAGCTG CTCATGGACG CTTGGTAGAT GACAATGGCA TAAACTTAAG CGAAGCTGCG 
GTCATTAGCA TCCGTCAGCA CCTTGATGTT CTTTATGCCA ATCTTGAGAA ATCTGGTGTT 
CCTGCTGGAT CTTCTACAGC AAGCAGACTC TTTAGCTAG
 
Protein sequence
MTMLGLSDLQ LALAVIGLLI LIAVAILNIK YARACRKAKE QGEYALDDRF AREPSFGQGF 
ADVGVAGRVE PSFGEAQPTT ISAPEKFAID PRIDCVITLR FDESISGAEI LNEIHAWTDL 
EAQSTARWMC EGLNANLDVA EDWEELHPDS TYSDLQLAIQ LASRKGPIGV LELSDFCSRA 
QALAETLGSQ IDMPSVSTML EGAKELDVMA AESDIQLSIN VLFDESCPWG NFDALMRQRG 
FKLSRNGRQY EYLSKGIVLF NSADLDPNKT VTQVTLLLEV PLVPQEERAF ERMLSEGVEI 
AQAAHGRLVD DNGINLSEAA VISIRQHLDV LYANLEKSGV PAGSSTASRL FS