Gene Pnec_0496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0496 
Symbol 
ID6184575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand+ 
Start bp442331 
End bp442840 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content45% 
IMG OID641671178 
Producthypothetical protein 
Protein accessionYP_001797374 
Protein GI171463261 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.696759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGAAAAA ACCTTTTGCT CCGTTCAAAG ATATTCATTT CAATATTTTT GTTATCTACT 
GCATTAAGTG GTGTTGTATT AGCTACCCCT GCAGAAGAGG CTGAGCTTGA GCAGTTGGAT 
AGGATTGAAC AAGAGTTAGA GCTCCAGCGT GAGTGGGCAA AGTATCGCTG GGGTAAATCA 
TCATCCGAGT GCTATCAAAA ATATTGGGTT AATTCTTGCT TAAAAGATGC CCGTGCTGAT 
TACCGCAAAG AAATCGACCC CATTCGGGAA CAAGAGGTGG CTTTGCATGA AGTGCAACGT 
AAGTTGCGCG AAAGCCTCAA GAACCAAGAA GACATAAAGC GCGCTGCTGA AAGAGCTTCA 
CCAGAAAAGG CTGCTGAAAG GGCTGCCAAT CAAGCTGAGT TCGATCAAAA GCAAAAGGAC 
GCAGCGGCTA GAGCGGCTGA TTTAGAGCAA CGTCGCAAAG ATGCTCCTAA GCGTGCACAA 
GAAAATAAAG TGGGCACTCA GCTCGATTAA
 
Protein sequence
MRKNLLLRSK IFISIFLLST ALSGVVLATP AEEAELEQLD RIEQELELQR EWAKYRWGKS 
SSECYQKYWV NSCLKDARAD YRKEIDPIRE QEVALHEVQR KLRESLKNQE DIKRAAERAS 
PEKAAERAAN QAEFDQKQKD AAARAADLEQ RRKDAPKRAQ ENKVGTQLD