| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0491 |
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| Symbol | |
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| ID | 6184534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 436545 |
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| End bp | 437279 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641671174 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_001797371 |
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| Protein GI | 171463258 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 78 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGATCG ATACCCATTG CCATCTAGAT GCTCCGGAGT TTGCGGATTC ATTGCCTACA
GTTATTCGTG CGGCTAAAGA AAAAAACGTT AAAGCAATTC TCTTACCGGC TGTAAAGGTG
GGTGACTGCG CTCATGTCAA GACATTGGTC TATCAATATA GCCAAGAGAT TCTTGGTTTG
GTCTACACCC TTGGGATTCA TCCACTTTAT ACCAATCAGG CGCAAGAAAG TGACATTGCT
ACGCTTGAAA AACATATTGT TGAATCACTT TCTGATCCTC GCTTTGTGGG TGTAGGTGAA
ATTGGTTTGG ATTATTTTGT GGAAGATTTG GATCCGCATA AACAAGAATT CTTTTTCAAT
GCGCAGTTGG ATTTAGCGCA GAAGTATCAA TTGCCTGTCA TCCTACATGT GCGCCGTTCA
CAAGATGCAA TCCTAAAAGC TTTGCGTCGT CGCAATATCT CTGGTGGTAT TGCCCATGCT
TTTAATGGCA GCTTTCAGCA AGCAGAACAA TTTATTGTGC TTGGATTTAA ATTAGGCTTT
GGTGGCGCGG CTACTTATGA GCGTGCCTTG CAAATTCGTA GGCTTCTTAA AGAATTGCCG
CTTAATAGCG TTGTGACTGA AACCGATTCA CCTGATATTC CGCCTGCATG GCTCAGAGAA
GAAGGCGTTG CGTTTAATGA GCCCGTATTT GTATCGCGGA TTGCACAAGA ATTGGCATTG
ATTCGGGGGT ATTGA
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| Protein sequence | MWIDTHCHLD APEFADSLPT VIRAAKEKNV KAILLPAVKV GDCAHVKTLV YQYSQEILGL
VYTLGIHPLY TNQAQESDIA TLEKHIVESL SDPRFVGVGE IGLDYFVEDL DPHKQEFFFN
AQLDLAQKYQ LPVILHVRRS QDAILKALRR RNISGGIAHA FNGSFQQAEQ FIVLGFKLGF
GGAATYERAL QIRRLLKELP LNSVVTETDS PDIPPAWLRE EGVAFNEPVF VSRIAQELAL
IRGY
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