| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0484 |
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| Symbol | |
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| ID | 6184556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 428062 |
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| End bp | 429036 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671167 |
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| Product | cysteine synthase A |
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| Protein accession | YP_001797364 |
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| Protein GI | 171463251 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0031] Cysteine synthase |
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| TIGRFAM ID | [TIGR01136] cysteine synthases
[TIGR01139] cysteine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.261567 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 81 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTACT TTACTGACAA CTCGCAAACT ATTGGTAAAA CACCTTTAGT TCGTTTAAAT
CGCGTAACTG ATGGTGCTAA AGCAACTGTG CTGGCGAAGA TTGAGGGTCG CAATCCGGCC
TATTCGGTTA AATGTCGTAT TGGTGTTGCA ATGATTAATG ATGCTCAAGA AAAAGGTCTT
CTAGGTCCTG GTAAGGAAAT CGTGGAACCT ACTGGCGGCA ATACCGGTAT CGCTTTGGCT
TTTGTAGCGG CTGCTCGCGG TATACCGCTG ACGCTTACCA TGCCGGAGAC TATGAGTGTT
GAGCGTCGCA AGTTGCTTAC TGCATTAGGT GCCAAGATTG TCTTGACTGA GGGTCCTAGG
GGTATGAATG ACGCTGTTGC TAAAGCCAAA GAAATTGCTG AGTCTGATTC TGCTAAACAT
GTGTTACTCC AACAATTTAG CAACCCATCT AATCCTGCAA TCCATGAAAA AACTACTGGC
CCAGAAATCT GGGAAGACAC CGAAGGCAAG ATCGATGTAT TTGTTGCTGG CGTAGGAACT
GGTGGAATAA TCTCTGGTGT TGGACGTTAC ATTAAGAATG TTCAGAAAAA GAATATTGAA
GTGGTTGCGG TTGAACCAAC TAGTAGTCCT GTAATTACCC AGAAGCTAAA TGGCGAAGAG
ATCAAGCCGG CTCCACATAA GATTCAAGGT ATTGGCGCTG GATTTATTCC GGATAATTTG
GATTTATCGA TAGTTGATAA GGTGGAGCAG ATTTCCAATG AAGAGGCTAT CGAGTTTGCC
CGCCGTATCG CCAAGGAGGA AGGTATTTTG GTGGGTATTT CCTATGGTGC GGCTGCGGCT
GTAGCGGTGC GCCTTGCCAA GAAGCCTGAA TATGTTGGCA AAACTATCGT GGTAGCTCTG
CCGGATGCCG CTGAGCGTTA CTTAAGCTCT GCCTTATTCG AAGGCGTGTT TGATGAGAGA
GGCTTGCCAG CTTAA
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| Protein sequence | MTYFTDNSQT IGKTPLVRLN RVTDGAKATV LAKIEGRNPA YSVKCRIGVA MINDAQEKGL
LGPGKEIVEP TGGNTGIALA FVAAARGIPL TLTMPETMSV ERRKLLTALG AKIVLTEGPR
GMNDAVAKAK EIAESDSAKH VLLQQFSNPS NPAIHEKTTG PEIWEDTEGK IDVFVAGVGT
GGIISGVGRY IKNVQKKNIE VVAVEPTSSP VITQKLNGEE IKPAPHKIQG IGAGFIPDNL
DLSIVDKVEQ ISNEEAIEFA RRIAKEEGIL VGISYGAAAA VAVRLAKKPE YVGKTIVVAL
PDAAERYLSS ALFEGVFDER GLPA
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