| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0472 |
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| Symbol | |
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| ID | 6183811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 420048 |
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| End bp | 420587 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671156 |
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| Product | co-chaperone Hsc20 |
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| Protein accession | YP_001797353 |
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| Protein GI | 171463240 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1076] DnaJ-domain-containing proteins 1 |
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| TIGRFAM ID | [TIGR00714] Fe-S protein assembly co-chaperone HscB |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.15714 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 81 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTGTGG TTGTGGCGAA TCCTTCCGCG TCTGACGATT ACTTTCGCTT CTTTGGATTA
AGTCAGCAAT TCAAAATCGA TTTGCCTGCT CTTGATCAGA CATACCTGGC GATTCAGAAG
GAAGTGCACC CTGATCGTTA TGCTCGCGGT AGTGATTCAG AACAGCGTCT TGCTATGCAG
ATGGCTACCT TGGCAAATAC CGCCTTTCAG ACCCTTAAAA ATCCAATTCA ACGCGGCTTG
TATTTATGCA AACTCCATGG CGTTGATGCT AAATTAGAAA CCAATACTGC GATGCCTGCT
GCTTTTCTAA TGAAACAGAT GGAGTGGCGC GAAAGCTTGG ATGACCAGGC GGAGGACCTA
CCAGCATTAG AAGTTTTGAT GGCTGAAGTT GAGGAATCCA AAGAGGACAC CCTTGCAGAA
ATTGCTCAAG CTATTGATGG CGCCAAAAAT TATGAGCGCG CAGCAGAGCT GCTGCGCGGG
TTACTCTTTA TTGATAAGTT TGCGGTTGAG CTTGACGACA CCATTGCTGC CTTAATCTAG
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| Protein sequence | MSVVVANPSA SDDYFRFFGL SQQFKIDLPA LDQTYLAIQK EVHPDRYARG SDSEQRLAMQ
MATLANTAFQ TLKNPIQRGL YLCKLHGVDA KLETNTAMPA AFLMKQMEWR ESLDDQAEDL
PALEVLMAEV EESKEDTLAE IAQAIDGAKN YERAAELLRG LLFIDKFAVE LDDTIAALI
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