| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0469 |
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| Symbol | |
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| ID | 6184452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 418062 |
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| End bp | 419321 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671153 |
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| Product | cysteine desulfurase IscS |
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| Protein accession | YP_001797350 |
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| Protein GI | 171463237 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
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| TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS
[TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00221025 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 81 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAC CAAAAGACCT GCCACAACAA CCGGTTCCGA TGTTTAGCCC TAAGCACTTT
CCGGTGTATA TGGACTATTC AGCTACTACG CCGATTGACC CACGTGTGGT CGACAAAATG
TTGCCTTATC TACGTGAGCA GTTTGGTAAT GCTGCGTCAC GCAGTCACGC TTATGGCTGG
GCTGCTGAAG AGGCGGTTGA GTGGGCGCGT TCAGAAGTTG CTCAATTAGT GTATGCCGAT
CCAAGAGAGA TCGTATTTAC TAGTGGCGCT ACTGAAAGTA TTAACTTAGC ACTAAAGGGC
GCAGCACATT TTTATAAAGA TCGCGGCAAT CACATCATTA CCGTTAAGAC TGAGCATAAG
GCAACATTAG ATACTTGCCG TGAATTAGAG CGTGAAGGTT ACGAAGTAAC TTACCTAGAT
GTGTTGCCAA ATGGCTTGAT TGATTTTGCG CAACTCGAAG CAGCGATGAA GCCCGGCACA
ATTTTGGCAT CCGTAATGTA TGTCAATAAT GAAATCGGCG TTGTGCAAGA TATTCCTGCG
ATTGGTGACT TATGCCGTTC GCGTGGTGTT ATCTTCCATG TGGATGCAGC ACAAGCGACT
GGTAAGGTAG AAATTGATTT AGAAAAGATC AAAGTTGATC TCATGAGTTT TTCTGCTCAT
AAGACATACG GCCCCAAAGG CATTGGCGCT CTGTTTGTGC GTCGTAAGCC ACGTATTCGT
ATTGAAGCGC AAATTCATGG CGGTGGCCAT GAGCGCGGTA TGCGTTCTGG AACCCTGGCA
GTTCACCAGA TTGTTGGCAT GGGCGAGGCA TTTCGTATTG CCCGCATTGA TATGGTTGAA
GAGAACAAAC GCATCCGTGC TTTGCGTGAT CGCTTGCTAA ACGGTTTGAA AGACATTAAA
GAGGTTTATG TCAATGGCGA CATGGACAAT CGTGTTCCAC ATAATCTGAA TATAAGTTTT
AACTACGTGG AAGGTGAGTC GATGTTGATG GCACTGAAGG ATTTGGCAAT CTCTTCAGGC
TCTGCCTGTA CTTCAGCATC CTTGGAGCCA TCTTATGTAT TGCGCGCCCT CGGTCGTAAT
GATGAGTTAG CGCATAGCTC AATTCGCTTT ACCTTGGGGC GTTTTACTAC TGAGGAAGAA
GTGGACTTCA CAATTAAGTT GGTTAAGGAA AAGATTGCCA AATTGCGTGA GTTGTCACCA
CTTTGGGAAA TGTATAAAGA CGGAATCGAC ATCAGTACGA TTCAATGGGC AGCACACTAA
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| Protein sequence | MNAPKDLPQQ PVPMFSPKHF PVYMDYSATT PIDPRVVDKM LPYLREQFGN AASRSHAYGW
AAEEAVEWAR SEVAQLVYAD PREIVFTSGA TESINLALKG AAHFYKDRGN HIITVKTEHK
ATLDTCRELE REGYEVTYLD VLPNGLIDFA QLEAAMKPGT ILASVMYVNN EIGVVQDIPA
IGDLCRSRGV IFHVDAAQAT GKVEIDLEKI KVDLMSFSAH KTYGPKGIGA LFVRRKPRIR
IEAQIHGGGH ERGMRSGTLA VHQIVGMGEA FRIARIDMVE ENKRIRALRD RLLNGLKDIK
EVYVNGDMDN RVPHNLNISF NYVEGESMLM ALKDLAISSG SACTSASLEP SYVLRALGRN
DELAHSSIRF TLGRFTTEEE VDFTIKLVKE KIAKLRELSP LWEMYKDGID ISTIQWAAH
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