| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0464 |
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| Symbol | |
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| ID | 6184379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 411760 |
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| End bp | 412446 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641671148 |
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| Product | electron transport complex, RnfABCDGE type, B subunit |
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| Protein accession | YP_001797345 |
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| Protein GI | 171463232 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2878] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB |
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| TIGRFAM ID | [TIGR01944] electron transport complex, RnfABCDGE type, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0463817 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 72 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAAA CAAATACCCT CATCGATCAA CTTGAGGATA TTCTTCCGCA AACACAATGT
ACTAAATGCG GCTACCCAGA TTGCCGCGGT TATGCAGAAG CAATGGCTAG TGGAGAGGCC
CTGCCTAATC GTTGCCCACC TGGTGGCGTA GAAGGCATTC GGCGTCTGAG CAGGGTTTTA
ATTCCCCTAT ACCCCCAAGA CGCATTTGAT TTGAACCGAG CAATTGATCC TGAATGCGGC
CTAGAAAGGC CTAGAGCGGT TGCCTTCATT GACCCCAAAA AGTGTATTGG TTGCACCTTA
TGCATCCAAG CCTGTCCTGT AGATGCAATT GTTGGCGCCT CCAAACAAAT GCACGTAGTA
CTGAGTGACT GGTGCACCGG TTGCAACCTC TGCATTCCAC CATGCCCCGT AGATTGCATC
AGCATGATCG ATGTCACCGG CGGGCAAACT GGTTGGGACG CCTGGTCACA AGATCTTGCT
GATTTCGCCC GCAAGCGCTA TCACAACCGT GAGAAACGTC TTGATAGAGA GCGACAGGAT
AATGATGACC GTCTCGCTAA AAAGGCTGCC GCTAAATTAA GGACGGTTGA TAGCGAAATA
CCGCAATCAG ACAAAGAATT AAAAGAACAA GAGCGCAAAC GCGCCATCAT TGCAGCTGCA
ATTGCCCGTG CCCAACAAAA GAAATGA
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| Protein sequence | MSQTNTLIDQ LEDILPQTQC TKCGYPDCRG YAEAMASGEA LPNRCPPGGV EGIRRLSRVL
IPLYPQDAFD LNRAIDPECG LERPRAVAFI DPKKCIGCTL CIQACPVDAI VGASKQMHVV
LSDWCTGCNL CIPPCPVDCI SMIDVTGGQT GWDAWSQDLA DFARKRYHNR EKRLDRERQD
NDDRLAKKAA AKLRTVDSEI PQSDKELKEQ ERKRAIIAAA IARAQQKK
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